RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 COQ8AQ8NI60 647 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 DTD1Q8TEA8 209 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 SEC22CQ9BRL7 303 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 MAGT1Q9H0U3 335 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 VSIRQ9H7M9 311 aa7.64□□□□□ -1.19
VPS4B-207ENST00000591519 PAIP2BQ9ULR5 123 aaKnown RBP7.64□□□□□ -1.19
VPS4B-207ENST00000591519 TRAV2A0A0B4J234 112 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 DUXBA0A1W2PPF3 345 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 GNG7O60262 68 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 UPK1BO75841 260 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 NPBWR1P48145 328 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 PAFAH1B2P68402 229 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 AARDQ4LEZ3 155 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 TOMM20LQ6UXN7 152 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 LRTM2Q8N967 370 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 SLC24A4Q8NFF2 622 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 PHLDA1Q8WV24 401 aaPredicted RBP7.63□□□□□ -1.19
VPS4B-207ENST00000591519 FNDC4Q9H6D8 234 aaPredicted RBP7.63□□□□□ -1.19
VPS4B-207ENST00000591519 MRPL36Q9P0J6 103 aaKnown RBP7.63□□□□□ -1.19
VPS4B-207ENST00000591519 ALMS1Q8TCU4 4167 aa7.63□□□□□ -1.19
VPS4B-207ENST00000591519 CCSO14618 274 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 DFFBO76075 338 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 TMEM50AO95807 157 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 SCGB1D2O95969 90 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 NPY1RP25929 384 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 HTR2BP41595 481 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 ASAH1Q13510 395 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 LGALS9CQ6DKI2 356 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 LILRB2Q8N423 598 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 DUSP18Q8NEJ0 188 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 ENKURQ8TC29 256 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 RARRES2Q99969 163 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 GINS3Q9BRX5 216 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 KRTAP4-11Q9BYQ6 195 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 HSPB7Q9UBY9 170 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 TMED3Q9Y3Q3 217 aa7.62□□□□□ -1.19
VPS4B-207ENST00000591519 IGHV3-49A0A0A0MS15 119 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 PIGBOS1A0A0B4J2F0 54 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 FAM25EA8MYX2 175 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 CORTO00230 105 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 WRBO00258 174 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 PITX3O75364 302 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 IFNA21P01568 189 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 APOHP02749 345 aaPredicted RBP7.61□□□□□ -1.19
VPS4B-207ENST00000591519 TFPI2P48307 235 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 BSXQ3C1V8 233 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 C2orf83Q53S99 150 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 ZNF600Q6ZNG1 722 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 TCF24Q7RTU0 167 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 GBGT1Q8N5D6 347 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 TMEM170AQ8WVE7 144 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
VPS4B-207ENST00000591519 GSKIPQ9P0R6 139 aa7.61□□□□□ -1.19
VPS4B-207ENST00000591519 IGKV3-7A0A075B6H7 116 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 IGHV3OR16-13A0A075B7E8 117 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 IGHV3-74A0A0B4J1X5 117 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 RPS10-NUDT3A0A1W2PQS6 291 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 IFNA4P05014 189 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 RND2P52198 227 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 POLR2GP62487 172 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS4B-207ENST00000591519 IAH1Q2TAA2 248 aaPredicted RBP7.6□□□□□ -1.19
VPS4B-207ENST00000591519 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 TIGITQ495A1 244 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 OR11H2Q8NH07 326 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 C11orf45Q8TAV5 145 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 ST8SIA2Q92186 375 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 ACY3Q96HD9 319 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 MFFQ9GZY8 342 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 MS4A6AQ9H2W1 248 aa7.6□□□□□ -1.19
VPS4B-207ENST00000591519 PUS1Q9Y606 427 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS4B-207ENST00000591519 A0A1W2PS18 150 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 H3BP45 60 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 SYNGR2O43760 224 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 SSSCA1O60232 199 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 CLN5O75503 358 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 MED6O75586 246 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 SLC25A6P12236 298 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 NPPCP23582 126 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 CRYBB3P26998 211 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 TCTAP57738 103 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 DEFB131AP59861 70 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 SPANXN5Q5MJ07 72 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 PRSS54Q6PEW0 395 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 NRARPQ7Z6K4 114 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 RPP25LQ8N5L8 163 aaKnown RBP7.59□□□□□ -1.19
VPS4B-207ENST00000591519 OR4X1Q8NH49 305 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 ZNF431Q8TF32 576 aaPredicted RBP7.59□□□□□ -1.19
VPS4B-207ENST00000591519 MITD1Q8WV92 249 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 CACFD1Q9UGQ2 172 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 U3KQ87 197 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 KMT2AQ03164 3969 aa7.59□□□□□ -1.19
VPS4B-207ENST00000591519 IGHV3-66A0A0C4DH42 116 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 C5orf51A6NDU8 294 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 FAM90A26D6RGX4 464 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 K7EQG2 157 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 DNASE2O00115 360 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 GIG44P09565 113 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 DEFA1P59665 94 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 DEFA3P59666 94 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms