RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
DNMT1-223ENST00000591239 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
DNMT1-223ENST00000591239 SEC22CQ9BRL7 303 aa6.84□□□□□ -1.31
DNMT1-223ENST00000591239 MS4A6AQ9H2W1 248 aa6.84□□□□□ -1.31
DNMT1-223ENST00000591239 GSKIPQ9P0R6 139 aa6.84□□□□□ -1.31
DNMT1-223ENST00000591239 STRAPQ9Y3F4 350 aaKnown RBP6.84□□□□□ -1.31
DNMT1-223ENST00000591239 IGKV1D-37A0A075B6S9 117 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
DNMT1-223ENST00000591239 ZFP92A6NM28 416 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 PRSS46E5RG02 174 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 DNASE2O00115 360 aaPredicted RBP6.83□□□□□ -1.32
DNMT1-223ENST00000591239 SSSCA1O60232 199 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 HNRNPCP07910 306 aaKnown RBP eCLIP6.83□□□□□ -1.32
DNMT1-223ENST00000591239 P2RY1P47900 373 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 IFITM3Q01628 133 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 ZNF90Q03938 601 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 USF2Q15853 346 aaPredicted RBP6.83□□□□□ -1.32
DNMT1-223ENST00000591239 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 ZBTB8BQ8NAP8 495 aaPredicted RBP6.83□□□□□ -1.32
DNMT1-223ENST00000591239 OR51G1Q8NGK1 321 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 SMIM8Q96KF7 97 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 PSENENQ9NZ42 101 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 U3KQE9 123 aa6.83□□□□□ -1.32
DNMT1-223ENST00000591239 IGKV1OR2-108A0A075B7D4 117 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 CCSO14618 274 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 SCGB1D2O95969 90 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 MBPP02686 304 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-223ENST00000591239 FABP1P07148 127 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 PAX9P55771 341 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 CMC4P56277 68 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-223ENST00000591239 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 APRG1Q8IVJ8 170 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 C12orf45Q8N5I9 185 aaPredicted RBP6.82□□□□□ -1.32
DNMT1-223ENST00000591239 THAP8Q8NA92 274 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 ENKURQ8TC29 256 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 RNF125Q96EQ8 232 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 GRAMD2BQ96HH9 432 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 RAB40CQ96S21 281 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 TRGV9Q99603 122 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 RETNQ9HD89 108 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 RABAC1Q9UI14 185 aa6.82□□□□□ -1.32
DNMT1-223ENST00000591239 TRAV2A0A0B4J234 112 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 C5orf51A6NDU8 294 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 SNRPGP15A8MWD9 76 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 FAM25EA8MYX2 175 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 IL5P05113 134 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 EIF2B2P49770 351 aaKnown RBP6.81□□□□□ -1.32
DNMT1-223ENST00000591239 TAS2R30P59541 319 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 ZNF124Q15973 351 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 OR8G2PQ6IF36 304 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 STXBP6Q8NFX7 210 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 MAP6D1Q9H9H5 199 aa6.81□□□□□ -1.32
DNMT1-223ENST00000591239 RCL1Q9Y2P8 373 aaKnown RBP6.81□□□□□ -1.32
DNMT1-223ENST00000591239 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 C7orf66A4D0T2 115 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 HELTA6NFD8 242 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 PMS2P5A8MQ11 134 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 K7EQG2 157 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 BUB3O43684 328 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 METTL15P1P0C7V9 234 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 RPL35AP18077 110 aaKnown RBP6.8□□□□□ -1.32
DNMT1-223ENST00000591239 AP2S1P53680 142 aaPredicted RBP6.8□□□□□ -1.32
DNMT1-223ENST00000591239 APOC4P55056 127 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 LYZP61626 148 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 AKR1C1Q04828 323 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 OR2F1Q13607 317 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 TMEM14EPQ6UXP3 125 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 ACOT7LQ6ZUV0 252 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 NRARPQ7Z6K4 114 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 C2orf50Q96LR7 162 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 PFDN2Q9UHV9 154 aa6.8□□□□□ -1.32
DNMT1-223ENST00000591239 KIR2DL5BA0A0G2JN68 375 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 KIR2DL5BA0A0G2JPC4 375 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 SMCO3A2RU48 225 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 UBE2CO00762 179 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 EREGO14944 169 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 TSC22D2O75157 780 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 CCNKO75909 580 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 NUP62P37198 522 aaPredicted RBP6.79□□□□□ -1.32
DNMT1-223ENST00000591239 DEFA1P59665 94 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 DEFA3P59666 94 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 DEFB131AP59861 70 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 RRAS2P62070 204 aaPredicted RBP6.79□□□□□ -1.32
DNMT1-223ENST00000591239 GSG1LQ6UXU4 331 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 SIGLEC15Q6ZMC9 328 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 TMEM144Q7Z5S9 345 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 KIR2DL5AQ8N109 375 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 OR10P1Q8NGE3 313 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 KIR2DL5BQ8NHK3 375 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 MUC7Q8TAX7 377 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
DNMT1-223ENST00000591239 GPN1Q9HCN4 374 aaPredicted RBP6.79□□□□□ -1.32
DNMT1-223ENST00000591239 LSM5Q9Y4Y9 91 aaKnown RBP6.79□□□□□ -1.32
DNMT1-223ENST00000591239 FNDC10F2Z333 226 aa6.78□□□□□ -1.32
DNMT1-223ENST00000591239 INMT-MINDY4F8WBC2 141 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms