RNA–Protein interactions for RNA: ENST00000591041.5

CAPNS1-212, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-212ENST00000591041 TMEM89A2RUT3 159 aa17.76■□□□□ 0.43
CAPNS1-212ENST00000591041 TOMM40O96008 361 aa17.76■□□□□ 0.43
CAPNS1-212ENST00000591041 SLC35B1P78383 322 aa17.76■□□□□ 0.43
CAPNS1-212ENST00000591041 C19orf35Q6ZS72 473 aa17.76■□□□□ 0.43
CAPNS1-212ENST00000591041 SOX21Q9Y651 276 aaPredicted RBP17.76■□□□□ 0.43
CAPNS1-212ENST00000591041 ZNF469Q96JG9 3925 aaPredicted RBP17.76■□□□□ 0.43
CAPNS1-212ENST00000591041 LOC102723971A0A1B0GUV8 181 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 NDUFB8O95169 186 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 CCL20P78556 96 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 ZNF90Q03938 601 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 C15orf32Q32M92 178 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 TMEM190Q8WZ59 177 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 HIGD1AQ9Y241 93 aa17.75■□□□□ 0.43
CAPNS1-212ENST00000591041 HOXA3O43365 443 aaPredicted RBP17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 SFTA3P0C7M3 94 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 TIGITQ495A1 244 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 GCSAMLQ5JQS6 135 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 SVBPQ8N300 66 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 OR1B1Q8NGR6 318 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 TMEM231Q9H6L2 316 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 PLXNB1O43157 2135 aa17.74■□□□□ 0.43
CAPNS1-212ENST00000591041 G3V318 75 aa17.73■□□□□ 0.43
CAPNS1-212ENST00000591041 TRGV3P03979 118 aa17.73■□□□□ 0.43
CAPNS1-212ENST00000591041 ARL14EPLP0DKL9 152 aa17.73■□□□□ 0.43
CAPNS1-212ENST00000591041 ORM2P19652 201 aa17.73■□□□□ 0.43
CAPNS1-212ENST00000591041 MRPL36Q9P0J6 103 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-212ENST00000591041 FLNAP21333 2647 aaKnown RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 SH2D7A6NKC9 451 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 HMGB3O15347 200 aaKnown RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 OR7C2O60412 319 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 PSG1P11464 419 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 GATA2P23769 480 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 GCHFRP30047 84 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 MEF2BQ02080 365 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 RELQ04864 619 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 C19orf54Q5BKX5 351 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 SOHLH1Q5JUK2 328 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 CCDC28AQ8IWP9 274 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 SIGLECL1Q8N7X8 197 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 RXFP4Q8TDU9 374 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 LINC00052Q96N35 136 aa17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 NKX6-2Q9C056 277 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 SEPSECSQ9HD40 501 aaKnown RBP17.72■□□□□ 0.43
CAPNS1-212ENST00000591041 PDE6DO43924 150 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 APOC3P02656 99 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 LYZP61626 148 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 BLCAPP62952 87 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 ZNF600Q6ZNG1 722 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 SSX7Q7RTT5 188 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 ZNF502Q8TBZ5 544 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 UHRF2Q96PU4 802 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 DOK5Q9P104 306 aa17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 CARHSP1Q9Y2V2 147 aaKnown RBP17.71■□□□□ 0.43
CAPNS1-212ENST00000591041 FBN3Q75N90 2809 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 F6UZH7 168 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 OR2C1O95371 312 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 TPPP2P59282 170 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 ICAM4Q14773 271 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 MIR17HGQ75NE6 70 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 LINC00305Q7Z4B0 112 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 CDC42EP3Q9UKI2 254 aa17.7■□□□□ 0.42
CAPNS1-212ENST00000591041 LINC01548A6NM66 108 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 TMEM250H0YL14 139 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 BMPR1BO00238 502 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 SNAPINO95295 136 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 IGKV1-17P01599 117 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 PF4V1P10720 104 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 RAB9AP51151 201 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 RPL15P61313 204 aaKnown RBP17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 DEFA5Q01523 94 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 FAM74A3Q4VXF1 159 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 ZNF418Q8TF45 676 aaPredicted RBP17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 TMEM37Q8WXS4 190 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 RNF125Q96EQ8 232 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 MS4A10Q96PG2 267 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 JMJD8Q96S16 334 aa17.69■□□□□ 0.42
CAPNS1-212ENST00000591041 PSMB11A5LHX3 300 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 FOSL1P15407 271 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 SRSF3P84103 164 aaKnown RBP17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 C10orf91Q5T1B1 145 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 CST9LP1Q5W188 147 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 OR5AU1Q8NGC0 362 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 RARRES2Q99969 163 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 PAXXQ9BUH6 204 aa17.68■□□□□ 0.42
CAPNS1-212ENST00000591041 OR2T8A6NH00 312 aa17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 PAGE4O60829 102 aa17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 IL4P05112 153 aa17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 SRP19P09132 144 aaKnown RBP17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 PPIFP30405 207 aaKnown RBP17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 UBE2L3P68036 154 aaKnown RBP17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 OR51M1Q9H341 326 aa17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 ABCA1O95477 2261 aa17.67■□□□□ 0.42
CAPNS1-212ENST00000591041 WI2-2373I1.2A0A1W2PRP0 233 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 C11orf94C9JXX5 98 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 OR4F5Q8NH21 305 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 OR4F4Q96R69 305 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 TCEAL7Q9BRU2 100 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 NIPSNAP3BQ9BS92 247 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 SCRT1Q9BWW7 348 aa17.66■□□□□ 0.42
CAPNS1-212ENST00000591041 GNB4Q9HAV0 340 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms