RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PET117Q6UWS5 81 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 TMEM105Q8N8V8 129 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 FAM222BQ8WU58 562 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 PRDM14Q9GZV8 571 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 MBNL3Q9NUK0 354 aaKnown RBP12.34□□□□□ -0.43
CIRBP-228ENST00000590347 GNG12Q9UBI6 72 aa12.34□□□□□ -0.43
CIRBP-228ENST00000590347 OR2J3O76001 311 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 GVINP1Q7Z2Y8 2422 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 IGLV3-32A0A0A0MS00 114 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 NPIPB11E5RHQ5 1161 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 FNDC10F2Z333 226 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 LTAP01374 205 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 PPP1R32Q7Z5V6 425 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 MRPL33O75394 65 aaKnown RBP12.33□□□□□ -0.44
CIRBP-228ENST00000590347 SP9P0CG40 484 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 LINC01545Q5VT33 79 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 MS4A6AQ9H2W1 248 aa12.33□□□□□ -0.44
CIRBP-228ENST00000590347 IGLV3-12A0A075B6K2 115 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 MGST3O14880 152 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PRR20EP86478 221 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PRR20CP86479 221 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PRR20DP86480 221 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PRR20BP86481 221 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PRR20AP86496 221 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PRSS3P2Q8NHM4 247 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 RAC3P60763 192 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
CIRBP-228ENST00000590347 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
CIRBP-228ENST00000590347 PEX7O00628 323 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 ERVK-16P61578 105 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 EIF4EBP1Q13541 118 aaPredicted RBP12.31□□□□□ -0.44
CIRBP-228ENST00000590347 COLCA1Q6ZS62 124 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 C1orf229Q6ZS94 237 aaPredicted RBP12.31□□□□□ -0.44
CIRBP-228ENST00000590347 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
CIRBP-228ENST00000590347 RNF183Q96D59 192 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 COQ2Q96H96 371 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 FAM173AQ9BQD7 235 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 POLDIP2Q9Y2S7 368 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 FAM87AP0C7U9 286 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 DSCR4P56555 118 aaPredicted RBP12.31□□□□□ -0.44
CIRBP-228ENST00000590347 TUSC5Q8IXB3 177 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 C12orf49Q9H741 205 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 A0A1B0GXF2 115 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 J3QT63 122 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 SLC25A5P05141 298 aaKnown RBP12.31□□□□□ -0.44
CIRBP-228ENST00000590347 MOB1BQ7L9L4 216 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 ABHD17AQ96GS6 310 aa12.31□□□□□ -0.44
CIRBP-228ENST00000590347 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
CIRBP-228ENST00000590347 ADAMTS20P59510 1910 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 TMEM30CPA0ZSE6 113 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 SMAD7O15105 426 aaKnown RBP12.3□□□□□ -0.44
CIRBP-228ENST00000590347 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
CIRBP-228ENST00000590347 TAS2R45P59539 299 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 RNF138Q8WVD3 245 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 FCER1GP30273 86 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 DUTP33316 252 aaKnown RBP12.3□□□□□ -0.44
CIRBP-228ENST00000590347 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
CIRBP-228ENST00000590347 MRPL14Q6P1L8 145 aaKnown RBP12.3□□□□□ -0.44
CIRBP-228ENST00000590347 MOSP00540 346 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 FA2HQ7L5A8 372 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 GGNQ86UU5 652 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
CIRBP-228ENST00000590347 ZGRF1Q86YA3 2104 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 C8orf88P0DMB2 117 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 PCOLCEQ15113 449 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 OR1C1Q15619 314 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 VGLL1Q99990 258 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 SLC25A33Q9BSK2 321 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 ZNRD1Q9P1U0 126 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 DKK2Q9UBU2 259 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 CACNA1GO43497 2377 aa12.29□□□□□ -0.44
CIRBP-228ENST00000590347 MT-ATP8P03928 68 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 TACC2O95359 2948 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 CEP250Q9BV73 2442 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 P01737 135 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 CFHR2P36980 270 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 CIARTQ8N365 385 aaPredicted RBP12.28□□□□□ -0.44
CIRBP-228ENST00000590347 ZADH2Q8N4Q0 377 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 SLC25A2Q9BXI2 301 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
CIRBP-228ENST00000590347 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
CIRBP-228ENST00000590347 IGKV2D-26A0A0A0MRZ7 120 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 IGHV3-21A0A0B4J1V1 117 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 TEX50A0A1B0GTY4 177 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 A0A1W2PRD5 423 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 A0A1W2PRF3 423 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 A0A1W2PRM7 423 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 PGPA6NDG6 321 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 SLC25A17O43808 307 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms