RNA–Protein interactions for RNA: ENST00000590181.5

LIG3-212, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,156 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-212ENST00000590181 TAS2R30P59541 319 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 NUTF2P61970 127 aaKnown RBP7.76□□□□□ -1.17
LIG3-212ENST00000590181 PPP1R1AQ13522 171 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 GAMTQ14353 236 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 TIGITQ495A1 244 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 C16orf54Q6UWD8 224 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 TRGV9Q99603 122 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 CCDC32Q9BV29 185 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 WFDC10AQ9H1F0 79 aa7.76□□□□□ -1.17
LIG3-212ENST00000590181 ZFP92A6NM28 416 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 FNDC10F2Z333 226 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 K7EQG2 157 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 BUB3O43684 328 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 IL4P05112 153 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 OR4E1P0C645 316 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 BAK1Q16611 211 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 SPATA31B1PQ5VZV4 182 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 LYG2Q86SG7 212 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 STHQ8IWL8 128 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 TMEM170AQ8WVE7 144 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 RNF125Q96EQ8 232 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 ACY3Q96HD9 319 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 GPR82Q96P67 336 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 C1QTNF4Q9BXJ3 329 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 NRN1Q9NPD7 142 aa7.75□□□□□ -1.17
LIG3-212ENST00000590181 STRAPQ9Y3F4 350 aaKnown RBP7.75□□□□□ -1.17
LIG3-212ENST00000590181 WRBO00258 174 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 PSG1P11464 419 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 IL7P13232 177 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 ID1P41134 155 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 MEOX2P50222 304 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 DHRS2Q13268 280 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 C4orf46Q504U0 113 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 THAP8Q8NA92 274 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 OR4D5Q8NGN0 318 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 DCANP1Q8TF63 244 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 GLMPQ8WWB7 406 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 SMIM8Q96KF7 97 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 RAB40CQ96S21 281 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 MFFQ9GZY8 342 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 MRPL36Q9P0J6 103 aaKnown RBP7.74□□□□□ -1.17
LIG3-212ENST00000590181 UBQLN2Q9UHD9 624 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 RYR1P21817 5038 aa7.74□□□□□ -1.17
LIG3-212ENST00000590181 IGHV3-49A0A0A0MS15 119 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 NUPR2A6NF83 97 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 APOHP02749 345 aaPredicted RBP7.73□□□□□ -1.17
LIG3-212ENST00000590181 HOXB5P09067 269 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 NKX2-1P43699 371 aaPredicted RBP7.73□□□□□ -1.17
LIG3-212ENST00000590181 TFPI2P48307 235 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 SELENOTP62341 195 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 MZT2BQ6NZ67 158 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 SIGLEC15Q6ZMC9 328 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 GBGT1Q8N5D6 347 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 STXBP6Q8NFX7 210 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 MITD1Q8WV92 249 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 GGACTQ9BVM4 153 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 C11orf68Q9H3H3 251 aaKnown RBP7.73□□□□□ -1.17
LIG3-212ENST00000590181 KMT2AQ03164 3969 aa7.73□□□□□ -1.17
LIG3-212ENST00000590181 IGHV3OR16-13A0A075B7E8 117 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 IGHV3-74A0A0B4J1X5 117 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 LYRM1O43325 122 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 TCTAP57738 103 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 DEFB131AP59861 70 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 DEFB135Q30KP9 77 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 PXDC1Q5TGL8 231 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 TMEM144Q7Z5S9 345 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 APRG1Q8IVJ8 170 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 LILRB2Q8N423 598 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 BPIFCQ8NFQ6 507 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 SDHCQ99643 169 aaPredicted RBP7.72□□□□□ -1.17
LIG3-212ENST00000590181 RARRES2Q99969 163 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 PRR13Q9NZ81 148 aa7.72□□□□□ -1.17
LIG3-212ENST00000590181 KLK5Q9Y337 293 aaPredicted RBP7.72□□□□□ -1.17
LIG3-212ENST00000590181 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 TSC22D2O75157 780 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 NXPH3O95157 252 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 TCRBP04435 133 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 RPL35AP18077 110 aaKnown RBP7.71□□□□□ -1.18
LIG3-212ENST00000590181 GALR1P47211 349 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 PSMB3P49720 205 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 ZNF846Q147U1 533 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 USF2Q15853 346 aaPredicted RBP7.71□□□□□ -1.18
LIG3-212ENST00000590181 SPANXN5Q5MJ07 72 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 TRPT1Q86TN4 253 aaKnown RBP7.71□□□□□ -1.18
LIG3-212ENST00000590181 HRH4Q9H3N8 390 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 NPVFQ9HCQ7 196 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 SELENOKQ9Y6D0 94 aa7.71□□□□□ -1.18
LIG3-212ENST00000590181 IGKV1D-37A0A075B6S9 117 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 PRSS46E5RG02 174 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 K7EPK0 472 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 ISLRO14498 428 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 LY6G6CO95867 125 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 CA1P00915 261 aaPredicted RBP7.7□□□□□ -1.18
LIG3-212ENST00000590181 MIFP14174 115 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 BTCP35070 178 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 DLK1P80370 383 aa7.7□□□□□ -1.18
LIG3-212ENST00000590181 OR8I2Q8N0Y5 310 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms