RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CXorf58Q96LI9 332 aa4.47□□□□□ -1.69
VPS25-204ENST00000589577 RCL1Q9Y2P8 373 aaKnown RBP4.47□□□□□ -1.69
VPS25-204ENST00000589577 F11RQ9Y624 299 aaKnown RBP4.47□□□□□ -1.69
VPS25-204ENST00000589577 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 SMCO3A2RU48 225 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 TEX22C9J3V5 150 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 H3BP45 60 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 MPC2O95563 127 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 TRGV3P03979 118 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 REG1AP05451 166 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 SLC25A4P12235 298 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 CXCL3P19876 107 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 FCGR2BP31994 310 aaPredicted RBP4.46□□□□□ -1.7
VPS25-204ENST00000589577 P2RY1P47900 373 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 NPBWR1P48145 328 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 AP2S1P53680 142 aaPredicted RBP4.46□□□□□ -1.7
VPS25-204ENST00000589577 MFAP2P55001 183 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 EIF5AP63241 154 aaKnown RBP4.46□□□□□ -1.7
VPS25-204ENST00000589577 AKR1C1Q04828 323 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 ATP5G2Q06055 141 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 BAXQ07812 192 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 RAB31Q13636 194 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 ZFP69Q49AA0 526 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 C2orf83Q53S99 150 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 OR8G2PQ6IF36 304 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 Q6ZRM9 215 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 ZNF546Q86UE3 836 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 TMEM61Q8N0U2 210 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 TTC9CQ8N5M4 171 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 POM121L12Q8N7R1 296 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 ZNF114Q8NC26 417 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 NECAP1Q8NC96 275 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 OR5T1Q8NG75 326 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 OR10W1Q8NGF6 305 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 OR1S2Q8NGQ3 325 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
VPS25-204ENST00000589577 EEF1AKMT3Q96AZ1 226 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 SMIM8Q96KF7 97 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 MFFQ9GZY8 342 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 C11orf68Q9H3H3 251 aaKnown RBP4.46□□□□□ -1.7
VPS25-204ENST00000589577 LYRM2Q9NU23 88 aaPredicted RBP4.46□□□□□ -1.7
VPS25-204ENST00000589577 MBD2Q9UBB5 411 aa4.46□□□□□ -1.7
VPS25-204ENST00000589577 TRBV7-1A0A0A6YYK4 115 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 BORCS7-ASMTA0A0B4J1R7 106 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 GNG7O60262 68 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 DFFBO76075 338 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 IFNA5P01569 189 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 CRYGCP07315 174 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 RBMY1CP0DJD4 496 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 MYOD1P15172 320 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 AREGP15514 252 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 RPL12P30050 165 aaKnown RBP4.45□□□□□ -1.7
VPS25-204ENST00000589577 S100A7P31151 101 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 S100A11P31949 105 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 SULT1A1P50225 295 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 APOC4P55056 127 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 RHOGP84095 191 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 WT1-ASQ06250 92 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 ZNF266Q14584 549 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 MRGPRG-AS1Q2M3A8 158 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 Q56UQ5 140 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 ZNF343Q6P1L6 599 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 SLC16A13Q7RTY0 426 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 S100A7AQ86SG5 101 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 TCTE3Q8IZS6 198 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 STPG3Q8N7X2 389 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 CHAC2Q8WUX2 184 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 CACNG8Q8WXS5 425 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 HYLS1Q96M11 299 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 KCNIP2Q9NS61 270 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 PFDN2Q9UHV9 154 aa4.45□□□□□ -1.7
VPS25-204ENST00000589577 IGLV2-18A0A075B6J9 118 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 TRAV30A0A087WSZ9 112 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 A0A0D9SG52 128 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 C2orf70A6NJV1 201 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 BMPR1BO00238 502 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 UBE2CO00762 179 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 DEFB4AO15263 64 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 NUPL2O15504 423 aaKnown RBP4.44□□□□□ -1.7
VPS25-204ENST00000589577 ARPC5O15511 151 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 OR2J3O76001 311 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 C1QBP02746 253 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 METTL15P1P0C7V9 234 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 RNASE2P10153 161 aaKnown RBP4.44□□□□□ -1.7
VPS25-204ENST00000589577 FOLR2P14207 255 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 MFAP4P55083 255 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 DLK1P80370 383 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 SLC38A11Q08AI6 406 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 OR2F1Q13607 317 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 ATP6V1FQ16864 119 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 RPEL1Q2QD12 228 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 C15orf32Q32M92 178 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 TMEM252Q8N6L7 170 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 ZNF709Q8N972 641 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 UBAC2Q8NBM4 344 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 SCGB1C1Q8TD33 95 aa4.44□□□□□ -1.7
VPS25-204ENST00000589577 VN1R17PQ8TDU5 208 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms