RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CGB1A6NKQ9 187 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 PEX7O00628 323 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 CRYGCP07315 174 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 RAB4BP61018 213 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 PAX2Q02962 417 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 PVRIGQ6DKI7 326 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 HCP5Q6MZN7 132 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 FAM231DQ6ZW35 169 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 C8orf46Q8TAG6 207 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 SAMD10Q9BYL1 202 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 RNASE7Q9H1E1 156 aaKnown RBP5.93□□□□□ -1.46
ZNF540-206ENST00000589117 F11RQ9Y624 299 aaKnown RBP5.93□□□□□ -1.46
ZNF540-206ENST00000589117 CEP250Q9BV73 2442 aa5.93□□□□□ -1.46
ZNF540-206ENST00000589117 TRAV5A0A0B4J249 113 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 SMIM27A0A1W2PRY6 76 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 CNIH1O95406 144 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 REG1AP05451 166 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 NBEAP1P0C6P0 100 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 ESDP10768 282 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 COL8A2P25067 703 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 HTR1DP28221 377 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 BRS3P32247 399 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 KLRB1Q12918 225 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 USF2Q15853 346 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-206ENST00000589117 OR10J3Q5JRS4 329 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF329Q86UD4 541 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 SIGLECL1Q8N7X8 197 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 ST6GALNAC3Q8NDV1 305 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 LINC01560Q8TB33 94 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 ZMAT5Q9UDW3 170 aaKnown RBP5.92□□□□□ -1.46
ZNF540-206ENST00000589117 EPDR1Q9UM22 224 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 IGKV1D-37A0A075B6S9 117 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 IZUMO1RA6ND01 250 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 WIPF1O43516 503 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 SLC25A5P05141 298 aaKnown RBP5.92□□□□□ -1.46
ZNF540-206ENST00000589117 CRYGBP07316 175 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
ZNF540-206ENST00000589117 PYYP10082 97 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 PLP1P60201 277 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 TMEM183BQ1AE95 376 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF841Q6ZN19 808 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 TMEM256Q8N2U0 113 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 NEU4Q8WWR8 484 aaPredicted RBP5.92□□□□□ -1.46
ZNF540-206ENST00000589117 FXYD5Q96DB9 178 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 IGF2BP2-AS1Q96M15 143 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 RASL11BQ9BPW5 248 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 PRO1933Q9H354 126 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 DPM3Q9P2X0 92 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 ONECUT1Q9UBC0 465 aa5.92□□□□□ -1.46
ZNF540-206ENST00000589117 SPENQ96T58 3664 aaKnown RBP5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ACACAQ13085 2346 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 PGPA6NDG6 321 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 A8MWP6 167 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 IGHV3-48P01763 117 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 COX7A1P24310 79 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 FXYD3Q14802 87 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 PATE2Q6UY27 113 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 C5orf17Q8NAS9 161 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 DAZAP1Q96EP5 407 aaKnown RBP5.91□□□□□ -1.46
ZNF540-206ENST00000589117 GRAMD2BQ96HH9 432 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 FMC1Q96HJ9 113 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 GPR82Q96P67 336 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 NAGKQ9UJ70 344 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 HIGD1AQ9Y241 93 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 TNCP24821 2201 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 MGAQ8IWI9 3026 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 GRIFINA4D1Z8 144 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF705FA8MVS1 300 aaPredicted RBP5.91□□□□□ -1.46
ZNF540-206ENST00000589117 SCGB2A1O75556 95 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 PLAUP00749 431 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 APCSP02743 223 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF705DP0CH99 300 aaPredicted RBP5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF705BP0CI00 300 aaPredicted RBP5.91□□□□□ -1.46
ZNF540-206ENST00000589117 MORN5Q5VZ52 161 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 CCDC144NLQ6NUI1 221 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF664Q8N3J9 261 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 BLNKQ8WV28 456 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 SRSF12Q8WXF0 261 aaKnown RBP5.91□□□□□ -1.46
ZNF540-206ENST00000589117 C14orf144Q96I85 54 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 RITA1Q96K30 269 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 TMEM68Q96MH6 324 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ATG101Q9BSB4 218 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 CBLN4Q9NTU7 201 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF586Q9NXT0 402 aa5.91□□□□□ -1.46
ZNF540-206ENST00000589117 LYNX1G3V0Z9 82 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 M0R1W7 72 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 ZNF253O75346 499 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 SERF1AO75920 110 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 IGLV2-8P01709 118 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 LYNX1P0DP58 116 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 SSBP2P81877 361 aaPredicted RBP5.9□□□□□ -1.46
ZNF540-206ENST00000589117 MMDQ15546 238 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 FAM162BQ5T6X4 162 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 ATP5L2Q7Z4Y8 100 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 LY6G5BQ8NDX9 201 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 WIPF2Q8TF74 440 aaPredicted RBP5.9□□□□□ -1.46
ZNF540-206ENST00000589117 FBXL15Q9H469 300 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 KLF12Q9Y4X4 402 aa5.9□□□□□ -1.46
ZNF540-206ENST00000589117 TRAV30A0A087WSZ9 112 aa5.9□□□□□ -1.47
ZNF540-206ENST00000589117 A8MWL6 223 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms