RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, human

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-215	ENST00000588913	SST	P61278	116 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	JOSD1	Q15040	202 aa	Predicted RBP	13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	ACSM6	Q6P461	480 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	SHISA2	Q6UWI4	295 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	OR1P1	Q8NH06	330 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	OR52E5	Q8NH55	327 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	TMEM170A	Q8WVE7	144 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	OR4F4	Q96R69	305 aa		13.83	□□□□□ -0.2
DNMT1-215	ENST00000588913	LINC00473	A8K010	186 aa		13.82	□□□□□ -0.2
DNMT1-215	ENST00000588913	G6PC	P35575	357 aa		13.82	□□□□□ -0.2
DNMT1-215	ENST00000588913	VDAC2	P45880	294 aa	Predicted RBP	13.82	□□□□□ -0.2
DNMT1-215	ENST00000588913	RAB24	Q969Q5	203 aa		13.82	□□□□□ -0.2
DNMT1-215	ENST00000588913	NOL4L	Q96MY1	436 aa	Predicted RBP	13.82	□□□□□ -0.2
DNMT1-215	ENST00000588913	CD28	P10747	220 aa		13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	KIR2DS2	P43631	304 aa		13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	CDC34	P49427	236 aa	Predicted RBP	13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	TCTEX1D4	Q5JR98	221 aa		13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	REC114	Q7Z4M0	266 aa		13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	RPUSD4	Q96CM3	377 aa	Known RBP	13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	GAB2	Q9UQC2	676 aa		13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	8e-9	■■■■□ 24.9
DNMT1-215	ENST00000588913	RPL30	P62888	115 aa	Known RBP	13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	SLC25A22	Q9H936	323 aa		13.81	□□□□□ -0.2
DNMT1-215	ENST00000588913	NBEAL1	Q6ZS30	2694 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	RAMP3	O60896	148 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	RBMXL2	O75526	392 aa	Known RBP	13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	S1PR2	O95136	353 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	MMD	Q15546	238 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	DDB2	Q92466	427 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	TPSG1	Q9NRR2	321 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	WDR83OS	Q9Y284	106 aa		13.8	□□□□□ -0.2
DNMT1-215	ENST00000588913	TET2	Q6N021	2002 aa	Predicted RBP	13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	HPRT1	P00492	218 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	IGHG2	P01859	326 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	DDT	P30046	118 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	DUT	P33316	252 aa	Known RBP	13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	SPCS3	P61009	180 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	ACTL10	Q5JWF8	245 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	GFI1B	Q5VTD9	330 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	TMEM18	Q96B42	140 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	WASHC3	Q9Y3C0	194 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	WNK1	Q9H4A3	2382 aa		13.79	□□□□□ -0.2
DNMT1-215	ENST00000588913	TRAV9-1	A0A075B6T8	112 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	XKRY2	A2RUG3	117 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	ADARB2-AS1	A8MUL3	147 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	C11orf94	C9JXX5	98 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913		M0QZK8	103 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	FCN1	O00602	326 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	NDUFA3	O95167	84 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	OPRK1	P41145	380 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	BRWD1-AS2	P59051	145 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	NDP	Q00604	133 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	NPB	Q8NG41	125 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	FBXL15	Q9H469	300 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	FBN3	Q75N90	2809 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913		A0A1W2PPV4	95 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	MARCH11	A6NNE9	402 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	NBR2	O15453	112 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	GPX4	P36969	197 aa	Predicted RBP	13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	ZNF329	Q86UD4	541 aa		13.78	□□□□□ -0.2
DNMT1-215	ENST00000588913	SRRM4	A7MD48	611 aa	Known RBP	13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	PAGE4	O60829	102 aa		13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	IGLV2-23	P01705	113 aa		13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	ERVK-16	P61578	105 aa		13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	GAMT	Q14353	236 aa		13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	R3HDM4	Q96D70	268 aa		13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	CITED2	Q99967	270 aa	Predicted RBP	13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	SLC35D1	Q9NTN3	355 aa		13.77	□□□□□ -0.21
DNMT1-215	ENST00000588913	MT-CO2	P00403	227 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	SSBP2	P81877	361 aa	Predicted RBP	13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	C5orf64	Q2M2E5	130 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	MRGPRG-AS1	Q2M3A8	158 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	PDZD11	Q5EBL8	140 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	ZNF600	Q6ZNG1	722 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	IGHV7-81	A0A0B4J1V7	117 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	AMBP	P02760	352 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	PSG5	Q15238	335 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	OR5AU1	Q8NGC0	362 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	OR4A16	Q8NH70	328 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	RASL11B	Q9BPW5	248 aa		13.76	□□□□□ -0.21
DNMT1-215	ENST00000588913	C15orf62	A8K5M9	175 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	RRH	O14718	337 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	CXorf1	O96002	111 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	MC5R	P33032	325 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	LCNL1	Q6ZST4	164 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	SSX9	Q7RTT3	188 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	PDPN	Q86YL7	162 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	C14orf144	Q96I85	54 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	ARL2-SNX15	V9GYD0	113 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913	MGAM2	Q2M2H8	2515 aa		13.75	□□□□□ -0.21
DNMT1-215	ENST00000588913		A0A1W2PPQ1	181 aa		13.74	□□□□□ -0.21
DNMT1-215	ENST00000588913	FNDC10	F2Z333	226 aa		13.74	□□□□□ -0.21
DNMT1-215	ENST00000588913	THBS3	P49746	956 aa		13.74	□□□□□ -0.21
DNMT1-215	ENST00000588913	RPL19	P84098	196 aa	Known RBP	13.74	□□□□□ -0.21
DNMT1-215	ENST00000588913	RAB31	Q13636	194 aa		13.74	□□□□□ -0.21
DNMT1-215	ENST00000588913	IQCJ	Q1A5X6	159 aa		13.74	□□□□□ -0.21
DNMT1-215	ENST00000588913	LY96	Q9Y6Y9	160 aa		13.74	□□□□□ -0.21

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