RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CLN5O75503 358 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 OR2C1O95371 312 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 HLA-DRB1P01911 266 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 IGLC1P0CG04 106 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
SMAD4-206ENST00000588860 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 PATE2Q6UY27 113 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 PQLC2Q6ZP29 291 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM219Q86XT9 240 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 TTC9CQ8N5M4 171 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 OR5T1Q8NG75 326 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 OR5AU1Q8NGC0 362 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 TXNDC17Q9BRA2 123 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 PARLQ9H300 379 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 SDF2L1Q9HCN8 221 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 ZNF355PQ9NSJ1 428 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 MOB4Q9Y3A3 225 aa6.91□□□□□ -1.3
SMAD4-206ENST00000588860 IGLV11-55A0A075B6I3 123 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 A0A096LNT2 108 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 SH2D7A6NKC9 451 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-206ENST00000588860 B4DEV8 164 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 HYPMO75409 117 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 FABP1P07148 127 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 OR10J4P0C629 311 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 EGR2P11161 476 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-206ENST00000588860 ORM2P19652 201 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 NPPCP23582 126 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 GATA3P23771 443 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 LYZP61626 148 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.3
SMAD4-206ENST00000588860 TNP2Q05952 138 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 PNRC1Q12796 327 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-206ENST00000588860 ADIRFQ15847 76 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 ECSCRQ19T08 205 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 TMEM241Q24JQ0 296 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 DEFB113Q30KQ7 82 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 UNQ5815/PRO19632Q6UWF5 114 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 C5orf56Q8N8D9 126 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 ZNF503Q96F45 646 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 FAM167A-AS1Q96KT0 104 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 UHRF2Q96PU4 802 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 MDFIQ99750 246 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 PAXXQ9BUH6 204 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 MEGF9Q9H1U4 602 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 SOX21Q9Y651 276 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-206ENST00000588860 S4R3C0 116 aa6.9□□□□□ -1.3
SMAD4-206ENST00000588860 A0A087WWC5 75 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 ELOA3CA0A087WX78 387 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-206ENST00000588860 COLCA2A8K830 154 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 ATP6V0E1O15342 81 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 NDUFB4O95168 129 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 NDUFB8O95169 186 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 MFAP4P55083 255 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 Q56UQ5 140 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 Q5PR19 223 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 C16orf82Q7Z2V1 217 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 LINC00305Q7Z4B0 112 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 OR51G1Q8NGK1 321 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 SGMS2Q8NHU3 365 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 SPATA3Q8NHX4 192 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 FAM110DQ8TAY7 271 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-206ENST00000588860 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 FANCD2OSQ96PS1 177 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 SSX3Q99909 188 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 TUBA4BQ9H853 241 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 HIGD1AQ9Y241 93 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 ARL2-SNX15V9GYD0 113 aa6.89□□□□□ -1.31
SMAD4-206ENST00000588860 PRRC2AP48634 2157 aaKnown RBP6.88□□□□□ -1.31
SMAD4-206ENST00000588860 H3BUX3 64 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 GNG7O60262 68 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 OR2J3O76001 311 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 IGKV1-17P01599 117 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 RD3LP0DJH9 198 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 PYYP10082 97 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 PSG1P11464 419 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 CD99P14209 185 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 HIST1H1BP16401 226 aaKnown RBP6.88□□□□□ -1.31
SMAD4-206ENST00000588860 CD33P20138 364 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 PLP1P60201 277 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 RPL23P62829 140 aaKnown RBP6.88□□□□□ -1.31
SMAD4-206ENST00000588860 LOXL1Q08397 574 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-206ENST00000588860 LY6EQ16553 131 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 LRRC75A-AS1Q8N1F1 130 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 MAPK1IP1LQ8NDC0 245 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 PIFOQ8TCI5 191 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 HIST1H2BAQ96A08 127 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 DERL1Q9BUN8 251 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 OR51M1Q9H341 326 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 THYN1Q9P016 225 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 FBXL7Q9UJT9 491 aa6.88□□□□□ -1.31
SMAD4-206ENST00000588860 TRAV30A0A087WSZ9 112 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 A0A1W2PRE2 83 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 A6NDX4 124 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 LINC01548A6NM66 108 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 J3QLI3 93 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 SCGB2A1O75556 95 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms