RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CDC34P49427 236 aaPredicted RBP17.28■□□□□ 0.36
ATG4D-209ENST00000588857 FOXE3Q13461 319 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 CCDC140Q96MF4 163 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 SLC25A22Q9H936 323 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 CTXND1A0A1B0GTU2 59 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 COX7A2P2O60397 106 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 TOMM40O96008 361 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 ELANEP08246 267 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 RHOBP62745 196 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 ZNF726P1Q15940 193 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 C10orf99Q6UWK7 81 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 LCNL1Q6ZST4 164 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 OR1L4Q8NGR5 311 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 PFDN5Q99471 154 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 DNAJC4Q9NNZ3 241 aa17.28■□□□□ 0.36
ATG4D-209ENST00000588857 SEC14L6B5MCN3 397 aa17.27■□□□□ 0.35
ATG4D-209ENST00000588857 LCN15Q6UWW0 184 aa17.27■□□□□ 0.35
ATG4D-209ENST00000588857 Q8WTZ3 238 aa17.27■□□□□ 0.35
ATG4D-209ENST00000588857 GATAD1Q8WUU5 269 aa17.27■□□□□ 0.35
ATG4D-209ENST00000588857 MBD3L1Q8WWY6 194 aa17.27■□□□□ 0.35
ATG4D-209ENST00000588857 DOK5Q9P104 306 aa17.27■□□□□ 0.35
ATG4D-209ENST00000588857 A0A1B0GV50 99 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 HBE1P02100 147 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 OR5G3P0C626 314 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 ORM2P19652 201 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 SLC7A5P1Q8MH63 180 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 COMMD1Q8N668 190 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 OR51G1Q8NGK1 321 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 OR1B1Q8NGR6 318 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 LYPD6BQ8NI32 183 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 RAB24Q969Q5 203 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 GNB4Q9HAV0 340 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 MED9Q9NWA0 146 aa17.26■□□□□ 0.35
ATG4D-209ENST00000588857 COL6A5A8TX70 2615 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 ELOA3CA0A087WX78 387 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-209ENST00000588857 MAP1LC3B2A6NCE7 125 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 TGOLN2O43493 480 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 HYPMO75409 117 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 IGHV3-11P01762 117 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 FAM78BQ5VT40 261 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 C10orf113Q5VZT2 155 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 SPSB3Q6PJ21 355 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 SSX7Q7RTT5 188 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 KLHDC1Q8N7A1 406 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 TMEM158Q8WZ71 300 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 RNF2Q99496 336 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 CHRDL1Q9BU40 450 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 MAP1LC3BQ9GZQ8 125 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 C16orf95Q9H693 158 aa17.25■□□□□ 0.35
ATG4D-209ENST00000588857 TRAV1-1A0A0B4J248 108 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 ADMP35318 185 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 PLP1P60201 277 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 LYZP61626 148 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 COMMD7Q86VX2 200 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 OR4X2Q8NGF9 303 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 TMEM37Q8WXS4 190 aa17.24■□□□□ 0.35
ATG4D-209ENST00000588857 SEPSECSQ9HD40 501 aaKnown RBP17.24■□□□□ 0.35
ATG4D-209ENST00000588857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.23■□□□□ 0.35
ATG4D-209ENST00000588857 HMGB3O15347 200 aaKnown RBP17.23■□□□□ 0.35
ATG4D-209ENST00000588857 RPLP1P05386 114 aaKnown RBP17.23■□□□□ 0.35
ATG4D-209ENST00000588857 PBDC1Q9BVG4 233 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 FUT9Q9Y231 359 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 NUDT19A8MXV4 375 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 EIF3GO75821 320 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATG4D-209ENST00000588857 IL4P05112 153 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 ARL3P36405 182 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 FGF8P55075 233 aaPredicted RBP17.23■□□□□ 0.35
ATG4D-209ENST00000588857 FAM209BQ5JX69 171 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 ZNF343Q6P1L6 599 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 IL34Q6ZMJ4 242 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 ZNF600Q6ZNG1 722 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 RNF152Q8N8N0 203 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 MARC2Q969Z3 335 aa17.23■□□□□ 0.35
ATG4D-209ENST00000588857 MRPL32Q9BYC8 188 aaKnown RBP17.23■□□□□ 0.35
ATG4D-209ENST00000588857 PPP5D1E7EU14 171 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 NDUFA7O95182 113 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 OR2C1O95371 312 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 RELQ04864 619 aaPredicted RBP17.22■□□□□ 0.35
ATG4D-209ENST00000588857 PATE2Q6UY27 113 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 ZNF491Q8N8L2 437 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 OR5AU1Q8NGC0 362 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 RNF125Q96EQ8 232 aa17.22■□□□□ 0.35
ATG4D-209ENST00000588857 WI2-2373I1.2A0A1W2PRP0 233 aa17.21■□□□□ 0.35
ATG4D-209ENST00000588857 ANKRD34BA5PLL1 514 aa17.21■□□□□ 0.35
ATG4D-209ENST00000588857 SRSF2Q01130 221 aaKnown RBP17.21■□□□□ 0.35
ATG4D-209ENST00000588857 KIAA0141Q14154 515 aaPredicted RBP17.21■□□□□ 0.35
ATG4D-209ENST00000588857 SPATA31B1PQ5VZV4 182 aa17.21■□□□□ 0.35
ATG4D-209ENST00000588857 MIR17HGQ75NE6 70 aa17.21■□□□□ 0.35
ATG4D-209ENST00000588857 TECRQ9NZ01 308 aaKnown RBP17.21■□□□□ 0.35
ATG4D-209ENST00000588857 HIGD1AQ9Y241 93 aa17.21■□□□□ 0.35
ATG4D-209ENST00000588857 PUS1Q9Y606 427 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATG4D-209ENST00000588857 TAS2R45P59539 299 aa17.2■□□□□ 0.34
ATG4D-209ENST00000588857 LINC00305Q7Z4B0 112 aa17.2■□□□□ 0.34
ATG4D-209ENST00000588857 LINC01006Q8NI28 216 aa17.2■□□□□ 0.34
ATG4D-209ENST00000588857 MYOZ3Q8TDC0 251 aa17.2■□□□□ 0.34
ATG4D-209ENST00000588857 UHRF2Q96PU4 802 aa17.2■□□□□ 0.34
ATG4D-209ENST00000588857 IGHV3-35A0A0C4DH35 117 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 STAG3L2P0CL84 134 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 STAG3L3P0CL85 134 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 CCL20P78556 96 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms