RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 C1orf196B1AJZ1 125 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 H3BQV1 296 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 GPR31O00270 319 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 BANF1O75531 89 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 P0C880 135 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
VMP1-208ENST00000588617 DYNAPQ8N1N2 210 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 TERB2Q8NHR7 220 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 SCGB3A1Q96QR1 104 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 MIXL1Q9H2W2 232 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 AMMECR1Q9Y4X0 333 aaPredicted RBP3.97□□□□□ -1.77
VMP1-208ENST00000588617 ANKRD26Q9UPS8 1709 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 IQSEC2Q5JU85 1478 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 NRKQ7Z2Y5 1582 aa3.97□□□□□ -1.77
VMP1-208ENST00000588617 SHROOM3Q8TF72 1996 aa3.96□□□□□ -1.77
VMP1-208ENST00000588617 WDR90Q96KV7 1748 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.96□□□□□ -1.78
VMP1-208ENST00000588617 ZSWIM8A7E2V4 1837 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 SLX4Q8IY92 1834 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 H7C2G1 150 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 SRIP30626 198 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 MIR17HGQ75NE6 70 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 RPP25LQ8N5L8 163 aaKnown RBP3.96□□□□□ -1.78
VMP1-208ENST00000588617 ZNF439Q8NDP4 499 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 OR52R1Q8NGF1 315 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 C20orf166-AS1Q96NR2 134 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 TMEM70Q9BUB7 260 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 DDA1Q9BW61 102 aa3.96□□□□□ -1.78
VMP1-208ENST00000588617 ITSN1Q15811 1721 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 MON2Q7Z3U7 1717 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 SHPRHQ149N8 1683 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 USP54Q70EL1 1684 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 CYB5BO43169 146 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 RPSAP08865 295 aaKnown RBP3.95□□□□□ -1.78
VMP1-208ENST00000588617 SUPT4H1P63272 117 aaKnown RBP3.95□□□□□ -1.78
VMP1-208ENST00000588617 TRAPPC6BQ86SZ2 158 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 TEX47Q8TBZ9 253 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 GINS4Q9BRT9 223 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 CHST6Q9GZX3 395 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 CCL26Q9Y258 94 aa3.95□□□□□ -1.78
VMP1-208ENST00000588617 SDHAF1A6NFY7 115 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 RFPL4AA6NLU0 287 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 RFPL4AL1F8VTS6 287 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 NFYAP23511 347 aaPredicted RBP3.94□□□□□ -1.78
VMP1-208ENST00000588617 GLRXP35754 106 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 YPEL3P61236 119 aaPredicted RBP3.94□□□□□ -1.78
VMP1-208ENST00000588617 ZNF90Q03938 601 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 EXOC3-AS1Q8N2X6 119 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 LYSMD1Q96S90 227 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 FMN2Q9NZ56 1722 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 AKAP12Q02952 1782 aa3.94□□□□□ -1.78
VMP1-208ENST00000588617 KIF20BQ96Q89 1820 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 NALCNQ8IZF0 1738 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 MUC21A0A0G2JKD1 596 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 MUC21A0A140T8X8 626 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 FNDC10F2Z333 226 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 CST8O60676 142 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 HIST3H2BBQ8N257 126 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 FAM24BQ8N5W8 94 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 OR10K1Q8NGX5 313 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 SERPINI1Q99574 410 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 RNF122Q9H9V4 155 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 ABCC6O95255 1503 aa3.93□□□□□ -1.78
VMP1-208ENST00000588617 C1orf167Q5SNV9 1468 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 PHRF1Q9P1Y6 1649 aaKnown RBP3.92□□□□□ -1.78
VMP1-208ENST00000588617 ARHGEF10O15013 1369 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 KIF1AQ12756 1690 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 CSRP1P21291 193 aaKnown RBP3.92□□□□□ -1.78
VMP1-208ENST00000588617 SCGB2B2Q4G0G5 96 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 FAM27BQ5VT28 67 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 TCF24Q7RTU0 167 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 Q8NDZ9 215 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 OSTCQ9NRP0 149 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 NDUFB11Q9NX14 153 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 SCN9AQ15858 1988 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 MYO16Q9Y6X6 1858 aa3.92□□□□□ -1.78
VMP1-208ENST00000588617 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 IGHV1-18A0A0C4DH31 117 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 RIIAD1A6NNX1 92 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 ERHP84090 104 aaKnown RBP3.91□□□□□ -1.78
VMP1-208ENST00000588617 TAF9Q16594 264 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 KRTAP13-3Q3SY46 172 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 OR4X2Q8NGF9 303 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 MALSU1Q96EH3 234 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 Q9BRP9 147 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 NDUFAF1Q9Y375 327 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 PTPRSQ13332 1948 aa3.91□□□□□ -1.78
VMP1-208ENST00000588617 PIK3C2AO00443 1686 aa3.9□□□□□ -1.78
VMP1-208ENST00000588617 NFAT5O94916 1531 aa3.9□□□□□ -1.78
VMP1-208ENST00000588617 PLXND1Q9Y4D7 1925 aa3.9□□□□□ -1.78
VMP1-208ENST00000588617 A0A1B0GVG6 124 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 MAP1LC3B2A6NCE7 125 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 ZNF860A6NHJ4 632 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 APOA2P02652 100 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 IGKV1-16P04430 117 aa3.9□□□□□ -1.79
VMP1-208ENST00000588617 TMEM258P61165 79 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms