RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 SLC35E1Q96K37 410 aa7.75□□□□□ -1.17
TPM4-209ENST00000588483 TRGV9Q99603 122 aa7.75□□□□□ -1.17
TPM4-209ENST00000588483 SEPSECSQ9HD40 501 aaKnown RBP7.75□□□□□ -1.17
TPM4-209ENST00000588483 IGKV1OR2-108A0A075B7D4 117 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 IGHV3-66A0A0C4DH42 116 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 HELTA6NFD8 242 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 IFNA21P01568 189 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 LYL1P12980 280 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 NUP62P37198 522 aaPredicted RBP7.74□□□□□ -1.17
TPM4-209ENST00000588483 NKX2-1P43699 371 aaPredicted RBP7.74□□□□□ -1.17
TPM4-209ENST00000588483 EIF2B2P49770 351 aaKnown RBP7.74□□□□□ -1.17
TPM4-209ENST00000588483 AP2S1P53680 142 aaPredicted RBP7.74□□□□□ -1.17
TPM4-209ENST00000588483 PLECQ15149 4684 aaKnown RBP7.74□□□□□ -1.17
TPM4-209ENST00000588483 APRG1Q8IVJ8 170 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 GBGT1Q8N5D6 347 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 RNF125Q96EQ8 232 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 MAGT1Q9H0U3 335 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 PTTG2Q9NZH5 202 aa7.74□□□□□ -1.17
TPM4-209ENST00000588483 IGKV3-7A0A075B6H7 116 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 ZFP92A6NM28 416 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 PMS2P5A8MQ11 134 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
TPM4-209ENST00000588483 WRBO00258 174 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 CFDP00746 253 aaPredicted RBP7.73□□□□□ -1.17
TPM4-209ENST00000588483 FABP1P07148 127 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 ATF4P18848 351 aaPredicted RBP7.73□□□□□ -1.17
TPM4-209ENST00000588483 TFPI2P48307 235 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 TAS2R30P59541 319 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 ASAH1Q13510 395 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 FAM24BQ8N5W8 94 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 STPG3Q8N7X2 389 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 RNF183Q96D59 192 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 SMIM8Q96KF7 97 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 NUDT15Q9NV35 164 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 RABAC1Q9UI14 185 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 TBC1D24Q9ULP9 559 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 STRAPQ9Y3F4 350 aaKnown RBP7.73□□□□□ -1.17
TPM4-209ENST00000588483 RYR2Q92736 4967 aa7.73□□□□□ -1.17
TPM4-209ENST00000588483 FNDC10F2Z333 226 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 SPRY2O43597 315 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 PAX9P55771 341 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 POLR2GP62487 172 aaKnown RBP eCLIP7.72□□□□□ -1.17
TPM4-209ENST00000588483 ZNF90Q03938 601 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 ZNF124Q15973 351 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 IAH1Q2TAA2 248 aaPredicted RBP7.72□□□□□ -1.17
TPM4-209ENST00000588483 SPANXN5Q5MJ07 72 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 C1orf194Q5T5A4 169 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 TMEM14EPQ6UXP3 125 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 ZBTB8BQ8NAP8 495 aaPredicted RBP7.72□□□□□ -1.17
TPM4-209ENST00000588483 IL17DQ8TAD2 202 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 RAB40CQ96S21 281 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 WDR12Q9GZL7 423 aaKnown RBP7.72□□□□□ -1.17
TPM4-209ENST00000588483 CSTL1Q9H114 145 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 PFDN2Q9UHV9 154 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 SLC45A2Q9UMX9 530 aa7.72□□□□□ -1.17
TPM4-209ENST00000588483 RCL1Q9Y2P8 373 aaKnown RBP7.72□□□□□ -1.17
TPM4-209ENST00000588483 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.17
TPM4-209ENST00000588483 AGRNO00468 2067 aa7.71□□□□□ -1.17
TPM4-209ENST00000588483 SNRPGP15A8MWD9 76 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 TSC22D2O75157 780 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 DEFB131AP59861 70 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 RPL11P62913 178 aaKnown RBP7.71□□□□□ -1.18
TPM4-209ENST00000588483 DEFB135Q30KP9 77 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 SIGLEC15Q6ZMC9 328 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 ACOT7LQ6ZUV0 252 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 TMEM144Q7Z5S9 345 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 STXBP6Q8NFX7 210 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 ZNF431Q8TF32 576 aaPredicted RBP7.71□□□□□ -1.18
TPM4-209ENST00000588483 GATAD1Q8WUU5 269 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 NRN1Q9NPD7 142 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 PSENENQ9NZ42 101 aa7.71□□□□□ -1.18
TPM4-209ENST00000588483 TRAV6A0A075B6T7 132 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 FAM240BA0A1B0GVZ2 78 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 H3BP45 60 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 SSSCA1O60232 199 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 UPK1BO75841 260 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 RPL35AP18077 110 aaKnown RBP7.7□□□□□ -1.18
TPM4-209ENST00000588483 DLK1P80370 383 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 TMEM41BQ5BJD5 291 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 MZT2BQ6NZ67 158 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 TRPT1Q86TN4 253 aaKnown RBP7.7□□□□□ -1.18
TPM4-209ENST00000588483 BATF3Q9NR55 127 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 FBXL17Q9UF56 701 aa7.7□□□□□ -1.18
TPM4-209ENST00000588483 PAIP2BQ9ULR5 123 aaKnown RBP7.7□□□□□ -1.18
TPM4-209ENST00000588483 C7orf66A4D0T2 115 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 K7EPK0 472 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 MBPP02686 304 aaPredicted RBP7.69□□□□□ -1.18
TPM4-209ENST00000588483 IL5P05113 134 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 H2AFB2P0C5Z0 115 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 ZNF688P0C7X2 276 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 SPP1P10451 314 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 PLP1P60201 277 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 LYZP61626 148 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 IL15RAQ13261 267 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 ZNF846Q147U1 533 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 LEMD1Q68G75 181 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 STHQ8IWL8 128 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 C12orf45Q8N5I9 185 aaPredicted RBP7.69□□□□□ -1.18
TPM4-209ENST00000588483 SEC22CQ9BRL7 303 aa7.69□□□□□ -1.18
TPM4-209ENST00000588483 PBDC1Q9BVG4 233 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms