RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 PSG1P11464 419 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 NUP62P37198 522 aaPredicted RBP11.48□□□□□ -0.57
ERCC1-206ENST00000588300 IL18Q14116 193 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 XCL2Q9UBD3 114 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 RABL2AQ9UBK7 228 aaPredicted RBP11.48□□□□□ -0.57
ERCC1-206ENST00000588300 RABL2BQ9UNT1 228 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 U3KQ87 197 aa11.48□□□□□ -0.57
ERCC1-206ENST00000588300 DEFB131BA0A096LNP1 70 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 H3BMM0 161 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 AMBPP02760 352 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 C12orf74Q32Q52 190 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 CLVS1Q8IUQ0 354 aaPredicted RBP11.47□□□□□ -0.57
ERCC1-206ENST00000588300 OR51S1Q8NGJ8 323 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 OR51G1Q8NGK1 321 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 RNF125Q96EQ8 232 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 DIRAS2Q96HU8 199 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 PFDN2Q9UHV9 154 aa11.47□□□□□ -0.57
ERCC1-206ENST00000588300 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
ERCC1-206ENST00000588300 CCR6P51684 374 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 SPCS2Q15005 226 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 ZNF767PQ75MW2 155 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 GPR141Q7Z602 305 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 LGI3Q8N145 548 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 DTD1Q8TEA8 209 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 SCGB3A2Q96PL1 93 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 PBDC1Q9BVG4 233 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 PRR13Q9NZ81 148 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 HSPB7Q9UBY9 170 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 SCP2D1Q9UJQ7 156 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
ERCC1-206ENST00000588300 A0A0B4J2A0 478 aa11.45□□□□□ -0.58
ERCC1-206ENST00000588300 KLF9Q13886 244 aaPredicted RBP11.45□□□□□ -0.58
ERCC1-206ENST00000588300 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
ERCC1-206ENST00000588300 OR8G2PQ6IF36 304 aa11.45□□□□□ -0.58
ERCC1-206ENST00000588300 LINC00336Q6ZUF6 198 aa11.45□□□□□ -0.58
ERCC1-206ENST00000588300 MRPS26Q9BYN8 205 aaKnown RBP11.45□□□□□ -0.58
ERCC1-206ENST00000588300 RBKSQ9H477 322 aa11.45□□□□□ -0.58
ERCC1-206ENST00000588300 SHPKQ9UHJ6 478 aa11.45□□□□□ -0.58
ERCC1-206ENST00000588300 ANKRD20A5PA0PJZ0 165 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 ZFP92A6NM28 416 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 P0DMU3 169 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
ERCC1-206ENST00000588300 SLC35E1Q96K37 410 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 NEU1Q99519 415 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 NDUFAF3Q9BU61 184 aa11.44□□□□□ -0.58
ERCC1-206ENST00000588300 FABP1P07148 127 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 ANXA3P12429 323 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 AKR1C4P17516 323 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 GPX4P36969 197 aaPredicted RBP11.43□□□□□ -0.58
ERCC1-206ENST00000588300 ID1P41134 155 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 ALDH3B2P48448 385 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 SRPXP78539 464 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 ZNF705AQ6ZN79 300 aaPredicted RBP11.43□□□□□ -0.58
ERCC1-206ENST00000588300 LYZL2Q7Z4W2 148 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 MCUBQ9NWR8 336 aa11.43□□□□□ -0.58
ERCC1-206ENST00000588300 CCDC59Q9P031 241 aaKnown RBP11.43□□□□□ -0.58
ERCC1-206ENST00000588300 TMEM189A5PLL7 270 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 ZNF705FA8MVS1 300 aaPredicted RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 PSMB3P49720 205 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 SUPT4H1P63272 117 aaKnown RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 ZNF90Q03938 601 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 GAMTQ14353 236 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 GDF5OSQ5U4N7 250 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 FOXI2Q6ZQN5 318 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 POM121L12Q8N7R1 296 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 OR1S1Q8NH92 325 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
ERCC1-206ENST00000588300 WDR12Q9GZL7 423 aaKnown RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 RSL24D1Q9UHA3 163 aaKnown RBP11.42□□□□□ -0.58
ERCC1-206ENST00000588300 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 IGKV1D-37A0A075B6S9 117 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 FXYD7P58549 80 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 LYZP61626 148 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 DYNC2LI1Q8TCX1 351 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 RAB2BQ8WUD1 216 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 SCRT1Q9BWW7 348 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
ERCC1-206ENST00000588300 KIAA1109Q2LD37 5005 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 EMP1P54849 157 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 DEFB1P60022 68 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 CLUHP3Q96NS8 147 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 RFNGQ9Y644 331 aa11.4□□□□□ -0.58
ERCC1-206ENST00000588300 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms