RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 RNF24Q9Y225 148 aa8.21□□□□□ -1.1
CHMP1B-202ENST00000588284 FUT9Q9Y231 359 aa8.21□□□□□ -1.1
CHMP1B-202ENST00000588284 CSPG4Q6UVK1 2322 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 ANKRD34BA5PLL1 514 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 KRBOX1C9JBD0 128 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 CLDN34H7C241 214 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 TOMM40O96008 361 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 OR5G3P0C626 314 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 STAG3L2P0CL84 134 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 STAG3L3P0CL85 134 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 C8orf88P0DMB2 117 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 SRD5A1P18405 259 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 GATA2P23769 480 aaPredicted RBP8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 RPL15P61313 204 aaKnown RBP8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 CCL20P78556 96 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 C15orf32Q32M92 178 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 TIGITQ495A1 244 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 STXBP6Q8NFX7 210 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 OR51G1Q8NGK1 321 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 ZNF502Q8TBZ5 544 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 SLC25A22Q9H936 323 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 LINC00527Q9UJ94 153 aa8.2□□□□□ -1.1
CHMP1B-202ENST00000588284 I3L521 148 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 IGLV1-40P01703 118 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 CLEC3BP05452 202 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 CRYBA1P05813 215 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 CD5P06127 495 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 PF4V1P10720 104 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 PSG1P11464 419 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 ORM2P19652 201 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 KHDC3LQ587J8 217 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 GCSAMLQ5JQS6 135 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 PQLC2Q6ZP29 291 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 Q6ZS46 218 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 Q8N2B8 174 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 TMEM37Q8WXS4 190 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 NOL4LQ96MY1 436 aaPredicted RBP8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
CHMP1B-202ENST00000588284 A0A1B0GV50 99 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 PSMB11A5LHX3 300 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 OR2C1O95371 312 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 IGHG4P01861 327 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 ELANEP08246 267 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 CTSGP08311 255 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 RAB9AP51151 201 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 TPPP2P59282 170 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 CFHR3Q02985 330 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 ZNF506Q5JVG8 444 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 TEX38Q6PEX7 206 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 ZNF600Q6ZNG1 722 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 OR1B1Q8NGR6 318 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 SUN5Q8TC36 379 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 TXNDC17Q9BRA2 123 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 GSX1Q9H4S2 264 aaPredicted RBP8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 ZNF702PQ9H963 129 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 SEPSECSQ9HD40 501 aaKnown RBP8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 GNG13Q9P2W3 67 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 VAX2Q9UIW0 290 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 HIGD1AQ9Y241 93 aa8.18□□□□□ -1.1
CHMP1B-202ENST00000588284 CCDC168Q8NDH2 2452 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 WI2-2373I1.2A0A1W2PRP0 233 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 TMEM218A2RU14 115 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 OR2T8A6NH00 312 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 DNAJC9-AS1A6NH13 148 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 RPLP1P05386 114 aaKnown RBP8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 FGF8P55075 233 aaPredicted RBP8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 RELQ04864 619 aaPredicted RBP8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 FOXE3Q13461 319 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 CLEC19AQ6UXS0 136 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 PATE2Q6UY27 113 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 MIR17HGQ75NE6 70 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 LINC00305Q7Z4B0 112 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 ZNF491Q8N8L2 437 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 NARS2Q96I59 477 aaKnown RBP8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 MRPL27Q9P0M9 148 aaKnown RBP8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 S4R3C0 116 aa8.17□□□□□ -1.1
CHMP1B-202ENST00000588284 LOC102723971A0A1B0GUV8 181 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 FAM181BA6NEQ2 426 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 F8W735 103 aaPredicted RBP8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 TGOLN2O43493 480 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 IGHV3-23P01764 117 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 RNASE1P07998 156 aaKnown RBP8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 BCL2P10415 239 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 GCHFRP30047 84 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 GPR183P32249 361 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 LYZP61626 148 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 HAGHQ16775 308 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 RNF125Q96EQ8 232 aa8.16□□□□□ -1.1
CHMP1B-202ENST00000588284 DUX5Q96PT3 197 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms