RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 Q56UQ5 140 aa12.95□□□□□ -0.34
NFIX-210ENST00000588228 C19orf54Q5BKX5 351 aa12.95□□□□□ -0.34
NFIX-210ENST00000588228 WFDC11Q8NEX6 87 aa12.95□□□□□ -0.34
NFIX-210ENST00000588228 OR51G1Q8NGK1 321 aa12.95□□□□□ -0.34
NFIX-210ENST00000588228 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
NFIX-210ENST00000588228 YTHDF2Q9Y5A9 579 aaKnown RBP12.95□□□□□ -0.34
NFIX-210ENST00000588228 SVEP1Q4LDE5 3571 aa12.95□□□□□ -0.34
NFIX-210ENST00000588228 NAV2Q8IVL1 2488 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 TRAV41A0A0B4J266 112 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 ZNF727A8MUV8 499 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 IGHG2P01859 326 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 IGF1P05019 195 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 LYZP61626 148 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 PNRC1Q12796 327 aaPredicted RBP12.94□□□□□ -0.34
NFIX-210ENST00000588228 C9orf152Q5JTZ5 239 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 PARLQ9H300 379 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 RPS10P5Q9NQ39 176 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 HIGD1AQ9Y241 93 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 S4R3C0 116 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 POLQO75417 2590 aa12.94□□□□□ -0.34
NFIX-210ENST00000588228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.94□□□□□ -0.343e-8■■■□□ 16.5
NFIX-210ENST00000588228 RHOGP84095 191 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 KIAA0141Q14154 515 aaPredicted RBP12.93□□□□□ -0.34
NFIX-210ENST00000588228 TMEM88Q6PEY1 159 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 NECAP1Q8NC96 275 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 RPUSD4Q96CM3 377 aaKnown RBP12.93□□□□□ -0.34
NFIX-210ENST00000588228 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 OR51M1Q9H341 326 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 CENPEQ02224 2701 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 DOPEY2Q9Y3R5 2298 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 NUPL2O15504 423 aaKnown RBP12.93□□□□□ -0.34
NFIX-210ENST00000588228 OR10J4P0C629 311 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 UBE2L3P68036 154 aaKnown RBP12.93□□□□□ -0.34
NFIX-210ENST00000588228 C15orf32Q32M92 178 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 OR5R1Q8NH85 324 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 FOXC2Q99958 501 aa12.93□□□□□ -0.34
NFIX-210ENST00000588228 MRPL27Q9P0M9 148 aaKnown RBP12.93□□□□□ -0.34
NFIX-210ENST00000588228 CR1P17927 2039 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 A0A1W2PRE2 83 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 NPPCP23582 126 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 IER3P46695 156 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 ZNF674Q2M3X9 581 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 SDF2L1Q9HCN8 221 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 SMCO4Q9NRQ5 59 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 NAT8Q9UHE5 227 aa12.92□□□□□ -0.34
NFIX-210ENST00000588228 APCP25054 2843 aa12.91□□□□□ -0.34
NFIX-210ENST00000588228 OR2C1O95371 312 aa12.91□□□□□ -0.34
NFIX-210ENST00000588228 ZNF491Q8N8L2 437 aa12.91□□□□□ -0.34
NFIX-210ENST00000588228 Q8WTZ3 238 aa12.91□□□□□ -0.34
NFIX-210ENST00000588228 C11orf52Q96A22 123 aa12.91□□□□□ -0.34
NFIX-210ENST00000588228 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
NFIX-210ENST00000588228 GAR1Q9NY12 217 aaKnown RBP12.91□□□□□ -0.34
NFIX-210ENST00000588228 WI2-2373I1.2A0A1W2PRP0 233 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 B4DEV8 164 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 PYYP10082 97 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 AKR1C3P42330 323 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 BLCAPP62952 87 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.34
NFIX-210ENST00000588228 TEX29Q8N6K0 151 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 FXYD5Q96DB9 178 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.34
NFIX-210ENST00000588228 ABCA12Q86UK0 2595 aa12.9□□□□□ -0.34
NFIX-210ENST00000588228 OR2T8A6NH00 312 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 FAM223BA6NKX1 122 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 AP4M1O00189 453 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 NDUFB4O95168 129 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 BRI3O95415 125 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 IL4P05112 153 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 CTSGP08311 255 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 Q6YL49 198 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 S100A7AQ86SG5 101 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 EEF1AKMT3Q96AZ1 226 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 ZNF580Q9UK33 172 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 A0A087WWC5 75 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 SCO2A0A1W2PP80 73 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 H3BUA1 57 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 MS4A10Q96PG2 267 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 ATP6V0BQ99437 205 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 TUBA4BQ9H853 241 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
NFIX-210ENST00000588228 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
NFIX-210ENST00000588228 TRBV7-1A0A0A6YYK4 115 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 H3BRN7 92 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 GP9P14770 177 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 PPIFP30405 207 aaKnown RBP12.88□□□□□ -0.35
NFIX-210ENST00000588228 SHANK2-AS3Q9BTD1 123 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 TMEM14CQ9P0S9 112 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 VPREB3Q9UKI3 123 aa12.88□□□□□ -0.35
NFIX-210ENST00000588228 TMA7Q9Y2S6 64 aaKnown RBP12.88□□□□□ -0.35
NFIX-210ENST00000588228 SMAD7O15105 426 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms