RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 C15orf40Q8WUR7 153 aa10.03□□□□□ -0.8
DNMT1-213ENST00000587604 AP3S1Q92572 193 aa10.03□□□□□ -0.8
DNMT1-213ENST00000587604 ACY3Q96HD9 319 aa10.03□□□□□ -0.8
DNMT1-213ENST00000587604 RTBDNQ9BSG5 229 aaPredicted RBP10.03□□□□□ -0.8
DNMT1-213ENST00000587604 NAA60Q9H7X0 242 aa10.03□□□□□ -0.8
DNMT1-213ENST00000587604 EXTL2Q9UBQ6 330 aa10.03□□□□□ -0.8
DNMT1-213ENST00000587604 CACFD1Q9UGQ2 172 aa10.03□□□□□ -0.8
DNMT1-213ENST00000587604 C14orf166Q9Y224 244 aaKnown RBP10.03□□□□□ -0.8
DNMT1-213ENST00000587604 NACAE9PAV3 2078 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 TNFAIP8O95379 198 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 NUP62P37198 522 aaPredicted RBP10.02□□□□□ -0.81
DNMT1-213ENST00000587604 GDF5OSQ5U4N7 250 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 STEAP1BQ6NZ63 245 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 UBE2DNLQ8IWF7 75 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 OR51G1Q8NGK1 321 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 SAV1Q9H4B6 383 aaPredicted RBP10.02□□□□□ -0.81
DNMT1-213ENST00000587604 DKK2Q9UBU2 259 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 RFNGQ9Y644 331 aa10.02□□□□□ -0.81
DNMT1-213ENST00000587604 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
DNMT1-213ENST00000587604 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 IGHV3OR16-12A0A075B7B8 117 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 ID1P41134 155 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 FXYD7P58549 80 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 SURF2Q15527 256 aaPredicted RBP10.01□□□□□ -0.81
DNMT1-213ENST00000587604 RNF212Q495C1 297 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 NMSQ5H8A3 153 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 SOHLH1Q5JUK2 328 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 FAM222AQ5U5X8 452 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 TMEM268Q5VZI3 342 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 FOXI2Q6ZQN5 318 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 RNF125Q96EQ8 232 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 LINC00052Q96N35 136 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 TMEM56-RWDD3S4R434 201 aa10.01□□□□□ -0.81
DNMT1-213ENST00000587604 ZNF182P17025 639 aaPredicted RBP10□□□□□ -0.81
DNMT1-213ENST00000587604 DEFB1P60022 68 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 SSBP1Q04837 148 aaKnown RBP10□□□□□ -0.81
DNMT1-213ENST00000587604 KLF9Q13886 244 aaPredicted RBP10□□□□□ -0.81
DNMT1-213ENST00000587604 MEF2DQ14814 521 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 OXA1LQ15070 435 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 GPR107Q5VW38 600 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 OR8G2PQ6IF36 304 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 ZNF709Q8N972 641 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 WDR12Q9GZL7 423 aaKnown RBP10□□□□□ -0.81
DNMT1-213ENST00000587604 U3KQ87 197 aa10□□□□□ -0.81
DNMT1-213ENST00000587604 CRYM-AS1A6NIL9 109 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 GABARAPH6UMI1 98 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 GABARAPO95166 117 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 SULT1A3P0DMM9 295 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 SULT1A4P0DMN0 295 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 PSMB3P49720 205 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 C1orf194Q5T5A4 169 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 SPATA31B1PQ5VZV4 182 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 FAAP20Q6NZ36 180 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 OR4B1Q8NGF8 309 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 PBDC1Q9BVG4 233 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 PLA2G2EQ9NZK7 142 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 GPR132Q9UNW8 380 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
DNMT1-213ENST00000587604 DISC1C4P0D8 188 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 SOCS3O14543 225 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 PSG9Q00887 426 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 ZNF79Q15937 498 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 LGI3Q8N145 548 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 COQ8AQ8NI60 647 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 IL22RA2Q969J5 263 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 GOLT1BQ9Y3E0 138 aa9.98□□□□□ -0.81
DNMT1-213ENST00000587604 ZFP92A6NM28 416 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 HBE1P02100 147 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 HTN3P15516 51 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 GPX4P36969 197 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-213ENST00000587604 PAX9P55771 341 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 ATP5IP56385 69 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-213ENST00000587604 SUPT4H1P63272 117 aaKnown RBP9.97□□□□□ -0.81
DNMT1-213ENST00000587604 MRPS10P82664 201 aaKnown RBP9.97□□□□□ -0.81
DNMT1-213ENST00000587604 ZNF90Q03938 601 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 GAMTQ14353 236 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 CTF1Q16619 201 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 C1orf134Q5TEV5 83 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 EBLN2Q6P2I7 272 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 DTD1Q8TEA8 209 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 C7orf50Q9BRJ6 194 aaKnown RBP9.97□□□□□ -0.81
DNMT1-213ENST00000587604 SLC35B3Q9H1N7 401 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 HSPB7Q9UBY9 170 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 KCNIP3Q9Y2W7 256 aa9.97□□□□□ -0.81
DNMT1-213ENST00000587604 YTHDF2Q9Y5A9 579 aaKnown RBP9.97□□□□□ -0.81
DNMT1-213ENST00000587604 IGKV1D-37A0A075B6S9 117 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 SNRPGP15A8MWD9 76 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 ISLRO14498 428 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 FABP1P07148 127 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 CCR6P51684 374 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 SMCO1Q147U7 214 aa9.96□□□□□ -0.82
DNMT1-213ENST00000587604 RRN3P1Q2M238 152 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms