RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
GFAP-205ENST00000585543 UQCC1Q9NVA1 299 aa12.72□□□□□ -0.37
GFAP-205ENST00000585543 MBD2Q9UBB5 411 aa12.72□□□□□ -0.37
GFAP-205ENST00000585543 CD5P06127 495 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 C8orf88P0DMB2 117 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 PSG1P11464 419 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 SELENOTP62341 195 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 EWSR1Q01844 656 aaKnown RBP eCLIP12.71□□□□□ -0.37
GFAP-205ENST00000585543 RNF125Q96EQ8 232 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 PBDC1Q9BVG4 233 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 SMPXQ9UHP9 88 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 RABAC1Q9UI14 185 aa12.71□□□□□ -0.37
GFAP-205ENST00000585543 H0YIZ8 118 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 HNRNPCP07910 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
GFAP-205ENST00000585543 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
GFAP-205ENST00000585543 LYZP61626 148 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 DEFA6Q01524 100 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 ZNF90Q03938 601 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 OR2F1Q13607 317 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 GUCA2BQ16661 112 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 DEFB114Q30KQ6 69 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
GFAP-205ENST00000585543 CYP2G1PQ6ZSU1 146 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 S100A7AQ86SG5 101 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 PPP1R14BQ96C90 147 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
GFAP-205ENST00000585543 IGKV1D-37A0A075B6S9 117 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 TRAV25A0A0B4J276 109 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 GP9P14770 177 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 EDN2P20800 178 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 RPL12P30050 165 aaKnown RBP12.69□□□□□ -0.38
GFAP-205ENST00000585543 ARL16Q0P5N6 197 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 ZNF546Q86UE3 836 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 GTSCR1Q86UQ5 136 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 WDR89Q96FK6 387 aaPredicted RBP12.69□□□□□ -0.38
GFAP-205ENST00000585543 MLXQ9UH92 298 aa12.69□□□□□ -0.38
GFAP-205ENST00000585543 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 UBE2L5PA0A1B0GUS4 154 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 CHEK1O14757 476 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 OR5C1Q8NGR4 320 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 OR2T35Q8NGX2 323 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
GFAP-205ENST00000585543 AURKAIP1Q9NWT8 199 aaPredicted RBP12.68□□□□□ -0.38
GFAP-205ENST00000585543 CMYA5Q8N3K9 4069 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 IGKV1OR2-108A0A075B7D4 117 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 WI2-2373I1.2A0A1W2PRP0 233 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 MPDU1O75352 247 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 DFFBO76075 338 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 CRYBB3P26998 211 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 NHLH2Q02577 135 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 PRR25Q96S07 402 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 HSPB11Q9Y547 144 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 SORL1Q92673 2214 aa12.67□□□□□ -0.38
GFAP-205ENST00000585543 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 PRB2P02812 416 aaPredicted RBP12.66□□□□□ -0.38
GFAP-205ENST00000585543 LYL1P12980 280 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 CAMLGP49069 296 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 RPL11P62913 178 aaKnown RBP12.66□□□□□ -0.38
GFAP-205ENST00000585543 CLINT1Q14677 625 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 USF2Q15853 346 aaPredicted RBP12.66□□□□□ -0.38
GFAP-205ENST00000585543 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 INO80EQ8NBZ0 244 aaPredicted RBP12.66□□□□□ -0.38
GFAP-205ENST00000585543 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 ZNF414Q96IQ9 312 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 VSIRQ9H7M9 311 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 KCNIP2Q9NS61 270 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 RNF24Q9Y225 148 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
GFAP-205ENST00000585543 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 HELTA6NFD8 242 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 OR4C46A6NHA9 309 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 TSPAN4O14817 238 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 AGPAT2O15120 278 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 IFNA5P01569 189 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 LINC00869P0C866 280 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 ORM2P19652 201 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 FGF7P21781 194 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 PXDC1Q5TGL8 231 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 TCF24Q7RTU0 167 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 ZNF709Q8N972 641 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 OR1B1Q8NGR6 318 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 MRAPQ8TCY5 172 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 RNF2Q99496 336 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 ATP5SQ99766 215 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
GFAP-205ENST00000585543 SLC45A2Q9UMX9 530 aa12.65□□□□□ -0.38
GFAP-205ENST00000585543 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
GFAP-205ENST00000585543 NBEAL1Q6ZS30 2694 aa12.65□□□□□ -0.39
GFAP-205ENST00000585543 IGHV3-66A0A0C4DH42 116 aa12.64□□□□□ -0.39
GFAP-205ENST00000585543 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
GFAP-205ENST00000585543 AP2S1P53680 142 aaPredicted RBP12.64□□□□□ -0.39
GFAP-205ENST00000585543 Q6ZRG5 221 aa12.64□□□□□ -0.39
GFAP-205ENST00000585543 FBXL17Q9UF56 701 aa12.64□□□□□ -0.39
GFAP-205ENST00000585543 SELENOKQ9Y6D0 94 aa12.64□□□□□ -0.39
GFAP-205ENST00000585543 NOTCH1P46531 2555 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms