RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 IL7P13232 177 aa10.88□□□□□ -0.67
VAPA-209ENST00000585042 CNPY1Q3B7I2 92 aa10.88□□□□□ -0.67
VAPA-209ENST00000585042 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
VAPA-209ENST00000585042 CSNK1G2-AS1Q8NCQ2 148 aa10.88□□□□□ -0.67
VAPA-209ENST00000585042 OR1S2Q8NGQ3 325 aa10.88□□□□□ -0.67
VAPA-209ENST00000585042 KRTAP17-1Q9BYP8 105 aa10.88□□□□□ -0.67
VAPA-209ENST00000585042 MRPL36Q9P0J6 103 aaKnown RBP10.88□□□□□ -0.67
VAPA-209ENST00000585042 A0A0B4J2A0 478 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 LINC00854A0A1B0GVQ3 168 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 ZNF688P0C7X2 276 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 VAMP1P23763 118 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 UBE2MP61081 183 aaKnown RBP10.87□□□□□ -0.67
VAPA-209ENST00000585042 NUTF2P61970 127 aaKnown RBP10.87□□□□□ -0.67
VAPA-209ENST00000585042 ETFRF1Q6IPR1 90 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 Q6ZRM9 215 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 NOXA1Q86UR1 476 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 RAB40CQ96S21 281 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 CCDC32Q9BV29 185 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 RNF126Q9BV68 326 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 C1QTNF4Q9BXJ3 329 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 PGPEP1Q9NXJ5 209 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 SHPKQ9UHJ6 478 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 TBC1D24Q9ULP9 559 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 X6R8D5 127 aa10.87□□□□□ -0.67
VAPA-209ENST00000585042 A0A0G2JRQ6 117 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 DUXBA0A1W2PPF3 345 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 HNRNPCP07910 306 aaKnown RBP eCLIP10.86□□□□□ -0.672e-7■□□□□ 11
VAPA-209ENST00000585042 IGLC1P0CG04 106 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 SULT1A3P0DMM9 295 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 SULT1A4P0DMN0 295 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 DHRS2Q13268 280 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 TIGITQ495A1 244 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 ACTL10Q5JWF8 245 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 LHFPL5Q8TAF8 219 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 GLMPQ8WWB7 406 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 HEYLQ9NQ87 328 aaPredicted RBP10.86□□□□□ -0.67
VAPA-209ENST00000585042 PTTG2Q9NZH5 202 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 CACNG5Q9UF02 275 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 AGRNO00468 2067 aa10.86□□□□□ -0.67
VAPA-209ENST00000585042 KNCNA6PVL3 124 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 J3QL48 77 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 NDUFB6O95139 128 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 C4BPBP20851 252 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 OR10J1P30954 320 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 CCR6P51684 374 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 SNRPD3P62318 126 aaKnown RBP10.85□□□□□ -0.67
VAPA-209ENST00000585042 SUPT4H1P63272 117 aaKnown RBP10.85□□□□□ -0.67
VAPA-209ENST00000585042 PRSS54Q6PEW0 395 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 GPR146Q96CH1 333 aa10.85□□□□□ -0.67
VAPA-209ENST00000585042 SDHCQ99643 169 aaPredicted RBP10.85□□□□□ -0.67
VAPA-209ENST00000585042 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
VAPA-209ENST00000585042 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
VAPA-209ENST00000585042 CEBPZOSA8MTT3 80 aa10.84□□□□□ -0.67
VAPA-209ENST00000585042 SMCO1Q147U7 214 aa10.84□□□□□ -0.67
VAPA-209ENST00000585042 Q6ZTC4 211 aa10.84□□□□□ -0.67
VAPA-209ENST00000585042 WDR12Q9GZL7 423 aaKnown RBP10.84□□□□□ -0.67
VAPA-209ENST00000585042 SFT2D2O95562 160 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 NPY1RP25929 384 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 RND2P52198 227 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 PPP1R1AQ13522 171 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 PSMG4Q5JS54 123 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 LYZL2Q7Z4W2 148 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 SLC24A4Q8NFF2 622 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 NRN1Q9NPD7 142 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 PFDN2Q9UHV9 154 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 TMED3Q9Y3Q3 217 aa10.83□□□□□ -0.68
VAPA-209ENST00000585042 FAM90A26D6RGX4 464 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 LYRM1O43325 122 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 BUB3O43684 328 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 TOMM40O96008 361 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 AMBPP02760 352 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 NUP62P37198 522 aaPredicted RBP10.82□□□□□ -0.68
VAPA-209ENST00000585042 ATP5IP56385 69 aaPredicted RBP10.82□□□□□ -0.68
VAPA-209ENST00000585042 ZNF846Q147U1 533 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 NMSQ5H8A3 153 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 LRTM2Q8N967 370 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 OR1S1Q8NH92 325 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 COQ8AQ8NI60 647 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 NEU1Q99519 415 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
VAPA-209ENST00000585042 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 SMIM9A6NGZ8 99 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 H3BMM0 161 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 IL4P05112 153 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 P0DMU3 169 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 FAM231AP0DMU4 169 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 FAM231CP0DMU5 169 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
VAPA-209ENST00000585042 USF2Q15853 346 aaPredicted RBP10.81□□□□□ -0.68
VAPA-209ENST00000585042 C12orf74Q32Q52 190 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 C4orf46Q504U0 113 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 MZT2BQ6NZ67 158 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 NPIPB3Q92617 1050 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 CLUHP3Q96NS8 147 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 CLEC5AQ9NY25 188 aa10.81□□□□□ -0.68
VAPA-209ENST00000585042 U3KQ87 197 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms