RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 H0Y8G0 127 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 TGOLN2O43493 480 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 NPPCP23582 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 ZNF137PP52743 207 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 CLEC19AQ6UXS0 136 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 H3BUX3 64 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BKO60814 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 IGKV3-20P01619 116 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BJP06899 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 PF4V1P10720 104 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BOP23527 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BBP33778 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BDP58876 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 RHOBP62745 196 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BCP62807 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 BLCAPP62952 87 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 EIF4EBP1Q13541 118 aaPredicted RBP8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST2H2BEQ16778 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.21□□□□□ -1.1
RFFL-212ENST00000584655 OR5AN1Q8NGI8 311 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 OSR1Q8TAX0 266 aaPredicted RBP8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 RASL11BQ9BPW5 248 aa8.21□□□□□ -1.1
RFFL-212ENST00000584655 HAX1O00165 279 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 UBE2CO00762 179 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 GCHFRP30047 84 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
RFFL-212ENST00000584655 TCTAP57738 103 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 Q6ZS46 218 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 DUX3Q96PT4 197 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 HSPB9Q9BQS6 159 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 GZMBP10144 247 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 TPTE2P1Q5T6R2 138 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 TUBA4BQ9H853 241 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 F6UZH7 168 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 CLDN34H7C241 214 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 PSG1P11464 419 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 KIR2DS2P43631 304 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 SERF2P84101 59 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 ZNF833PQ6ZTB9 187 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 MMD2Q8IY49 270 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 VSTM2AQ8TAG5 236 aa8.2□□□□□ -1.1
RFFL-212ENST00000584655 BEX4Q9NWD9 120 aaPredicted RBP8.2□□□□□ -1.1
RFFL-212ENST00000584655 CD69Q07108 199 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 C10orf99Q6UWK7 81 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 FAM90A26D6RGX4 464 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 HLA-DMBP28068 263 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 OR1L4Q8NGR5 311 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
RFFL-212ENST00000584655 NBR2O15453 112 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 HTN1P15515 57 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 AGAP20933 346 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 GALR1P47211 349 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
RFFL-212ENST00000584655 FAM90A2PQ658T7 463 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 SGMS2Q8NHU3 365 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 GLMPQ8WWB7 406 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 PAXXQ9BUH6 204 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 MGAM2Q2M2H8 2515 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 MC5RP33032 325 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 CEACAM3P40198 252 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 PDPNQ86YL7 162 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 SEBOXQ9HB31 216 aaPredicted RBP8.19□□□□□ -1.1
RFFL-212ENST00000584655 DNAJC4Q9NNZ3 241 aa8.19□□□□□ -1.1
RFFL-212ENST00000584655 SEC14L6B5MCN3 397 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 GPX4P36969 197 aaPredicted RBP8.18□□□□□ -1.1
RFFL-212ENST00000584655 PRNTQ86SH4 94 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 OCC1Q8TAD7 63 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 RBFOX2O43251 390 aaKnown RBP eCLIP8.18□□□□□ -1.12e-6■■□□□ 13
RFFL-212ENST00000584655 AVPP01185 164 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 P0C879 139 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 ELOBQ15370 118 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 CYP2G1PQ6ZSU1 146 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 ZNF843Q8N446 348 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 MALSU1Q96EH3 234 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 C1orf159Q96HA4 380 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 NDUFA4L2Q9NRX3 87 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 CLEC3BP05452 202 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 DDTP30046 118 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 PPIFP30405 207 aaKnown RBP8.18□□□□□ -1.1
RFFL-212ENST00000584655 CTAG1AP78358 180 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 ATP6V1FQ16864 119 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 NEU4Q8WWR8 484 aaPredicted RBP8.18□□□□□ -1.1
RFFL-212ENST00000584655 SAMD10Q9BYL1 202 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 FKBP11Q9NYL4 201 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 FBXL7Q9UJT9 491 aa8.18□□□□□ -1.1
RFFL-212ENST00000584655 NDUFB8O95169 186 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 IGLV1-47P01700 117 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 CBLN1P23435 193 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 RPL23P62829 140 aaKnown RBP8.17□□□□□ -1.1
RFFL-212ENST00000584655 GOLT1AQ6ZVE7 132 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms