RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 KCNIP2Q9NS61 270 aa14.06□□□□□ -0.16
RFFL-211ENST00000584541 ZNF320A2RRD8 509 aa14.05□□□□□ -0.16
RFFL-211ENST00000584541 HNRNPCP07910 306 aaKnown RBP eCLIP14.05□□□□□ -0.164e-6■□□□□ 11.1
RFFL-211ENST00000584541 PSG1P11464 419 aa14.05□□□□□ -0.16
RFFL-211ENST00000584541 RPL7L1Q6DKI1 246 aaKnown RBP14.05□□□□□ -0.16
RFFL-211ENST00000584541 C9orf62Q8N4C0 152 aa14.05□□□□□ -0.16
RFFL-211ENST00000584541 PPP1R14BQ96C90 147 aa14.05□□□□□ -0.16
RFFL-211ENST00000584541 GGTLC1Q9BX51 225 aa14.05□□□□□ -0.16
RFFL-211ENST00000584541 NPCDR1Q9BY65 106 aa14.05□□□□□ -0.16
RFFL-211ENST00000584541 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
RFFL-211ENST00000584541 NKX2-5P52952 324 aaPredicted RBP14.04□□□□□ -0.16
RFFL-211ENST00000584541 EIF5AP63241 154 aaKnown RBP14.04□□□□□ -0.16
RFFL-211ENST00000584541 GINS3Q9BRX5 216 aa14.04□□□□□ -0.16
RFFL-211ENST00000584541 C20orf24Q9BUV8 137 aa14.04□□□□□ -0.16
RFFL-211ENST00000584541 ZNF471Q9BX82 626 aaPredicted RBP14.04□□□□□ -0.16
RFFL-211ENST00000584541 SLC45A2Q9UMX9 530 aa14.04□□□□□ -0.16
RFFL-211ENST00000584541 SYNJ2BPP57105 145 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 KLF5Q13887 457 aaPredicted RBP14.03□□□□□ -0.16
RFFL-211ENST00000584541 OPCMLQ14982 345 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 TOMM20LQ6UXN7 152 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 REC114Q7Z4M0 266 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 HSD17B11Q8NBQ5 300 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 TMEM190Q8WZ59 177 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 PEMTQ9UBM1 199 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 UFC1Q9Y3C8 167 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 COL6A5A8TX70 2615 aa14.03□□□□□ -0.16
RFFL-211ENST00000584541 BOLA2-SMG1P6H3BVE0 249 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 LGALS9O00182 355 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 IL4P05112 153 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 LINC00869P0C866 280 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 RPL29P47914 159 aaKnown RBP14.02□□□□□ -0.17
RFFL-211ENST00000584541 LYZP61626 148 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 Q6ZRG5 221 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 DLX4Q92988 240 aaPredicted RBP14.02□□□□□ -0.17
RFFL-211ENST00000584541 GNPNAT1Q96EK6 184 aaPredicted RBP14.02□□□□□ -0.17
RFFL-211ENST00000584541 RCC1LQ96I51 464 aaKnown RBP14.02□□□□□ -0.17
RFFL-211ENST00000584541 CYTL1Q9NRR1 136 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 TIMM9Q9Y5J7 89 aa14.02□□□□□ -0.17
RFFL-211ENST00000584541 OVOL1O14753 267 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 GATA2P23769 480 aaPredicted RBP14.01□□□□□ -0.17
RFFL-211ENST00000584541 B2MP61769 119 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 PXDC1Q5TGL8 231 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 MIC13Q5XKP0 118 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 LAMTOR1Q6IAA8 161 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 UNQ9165/PRO28630Q6UXU0 137 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 STPG3Q8N7X2 389 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 SPATA3Q8NHX4 192 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 RNF125Q96EQ8 232 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 RSG1Q9BU20 258 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 PBDC1Q9BVG4 233 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 ZFAND3Q9H8U3 227 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 PXMP4Q9Y6I8 212 aa14.01□□□□□ -0.17
RFFL-211ENST00000584541 IGHV3OR16-8A0A075B7F1 116 aa14□□□□□ -0.17
RFFL-211ENST00000584541 WI2-2373I1.2A0A1W2PRP0 233 aa14□□□□□ -0.17
RFFL-211ENST00000584541 TSPAN15O95858 294 aa14□□□□□ -0.17
RFFL-211ENST00000584541 ATP6V0CP27449 155 aa14□□□□□ -0.17
RFFL-211ENST00000584541 S100A7P31151 101 aa14□□□□□ -0.17
RFFL-211ENST00000584541 ELLP55199 621 aaPredicted RBP14□□□□□ -0.17
RFFL-211ENST00000584541 PRR20EP86478 221 aa14□□□□□ -0.17
RFFL-211ENST00000584541 PRR20CP86479 221 aa14□□□□□ -0.17
RFFL-211ENST00000584541 PRR20DP86480 221 aa14□□□□□ -0.17
RFFL-211ENST00000584541 PRR20BP86481 221 aa14□□□□□ -0.17
RFFL-211ENST00000584541 PRR20AP86496 221 aa14□□□□□ -0.17
RFFL-211ENST00000584541 TMEM182Q6ZP80 229 aaPredicted RBP14□□□□□ -0.17
RFFL-211ENST00000584541 OR9G4Q8NGQ1 327 aa14□□□□□ -0.17
RFFL-211ENST00000584541 METTL26Q96S19 204 aa14□□□□□ -0.17
RFFL-211ENST00000584541 PSMG3Q9BT73 122 aaPredicted RBP14□□□□□ -0.17
RFFL-211ENST00000584541 DAZ1Q9NQZ3 744 aaKnown RBP14□□□□□ -0.17
RFFL-211ENST00000584541 SLC39A9Q9NUM3 307 aa14□□□□□ -0.17
RFFL-211ENST00000584541 PFDN2Q9UHV9 154 aa14□□□□□ -0.17
RFFL-211ENST00000584541 TENM1Q9UKZ4 2725 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 A8MWP6 167 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 K7EMT4 169 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 TPT1P13693 172 aaKnown RBP13.99□□□□□ -0.17
RFFL-211ENST00000584541 ORM2P19652 201 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 S100A7AQ86SG5 101 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 SLC51BQ86UW2 128 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 LINC00482Q8N8I6 264 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 OR1B1Q8NGR6 318 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 NARS2Q96I59 477 aaKnown RBP13.99□□□□□ -0.17
RFFL-211ENST00000584541 ZNF414Q96IQ9 312 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 ELOVL1Q9BW60 279 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 RABAC1Q9UI14 185 aa13.99□□□□□ -0.17
RFFL-211ENST00000584541 HYPMO75409 117 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 OR5G3P0C626 314 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 NPPCP23582 126 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 PLP1P60201 277 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 FFAR4Q5NUL3 377 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 OR1L4Q8NGR5 311 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 PFDN5Q99471 154 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 ARV1Q9H2C2 271 aa13.98□□□□□ -0.17
RFFL-211ENST00000584541 ELOA3CA0A087WX78 387 aaPredicted RBP13.97□□□□□ -0.17
RFFL-211ENST00000584541 ZNF207O43670 478 aaKnown RBP13.97□□□□□ -0.17
RFFL-211ENST00000584541 COX7A2P2O60397 106 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 CD33P20138 364 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 BMI1P35226 326 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 SERF2P84101 59 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 USF2Q15853 346 aaPredicted RBP13.97□□□□□ -0.17
RFFL-211ENST00000584541 TM4SF20Q53R12 229 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 BAP18Q8IXM2 172 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms