RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 ACTL10Q5JWF8 245 aa9.98□□□□□ -0.81
CDK5RAP3-233ENST00000584186 TRIQKQ629K1 86 aa9.98□□□□□ -0.81
CDK5RAP3-233ENST00000584186 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
CDK5RAP3-233ENST00000584186 DEDD2Q8WXF8 326 aa9.98□□□□□ -0.81
CDK5RAP3-233ENST00000584186 MAGT1Q9H0U3 335 aa9.98□□□□□ -0.81
CDK5RAP3-233ENST00000584186 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 DEFB4AO15263 64 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 GPX4P36969 197 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 RAB11AP62491 216 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 ZNF90Q03938 601 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 BAK1Q16611 211 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 CEMP1Q6PRD7 247 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 SIGLEC15Q6ZMC9 328 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 TRPT1Q86TN4 253 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 LRTM2Q8N967 370 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 RNF125Q96EQ8 232 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 TMED3Q9Y3Q3 217 aa9.97□□□□□ -0.81
CDK5RAP3-233ENST00000584186 WRBO00258 174 aa9.96□□□□□ -0.82
CDK5RAP3-233ENST00000584186 BUB3O43684 328 aa9.96□□□□□ -0.82
CDK5RAP3-233ENST00000584186 MED6O75586 246 aa9.96□□□□□ -0.82
CDK5RAP3-233ENST00000584186 OR2F1Q13607 317 aa9.96□□□□□ -0.82
CDK5RAP3-233ENST00000584186 ALMS1Q8TCU4 4167 aa9.96□□□□□ -0.82
CDK5RAP3-233ENST00000584186 EPPK1P58107 5090 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 IGKV1D-37A0A075B6S9 117 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 FAM90A26D6RGX4 464 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SYNGR2O43760 224 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 LY6G6CO95867 125 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 FABP1P07148 127 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SLC25A6P12236 298 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 ATF4P18848 351 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NANOS2P60321 138 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 LYZP61626 148 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SNRPD3P62318 126 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 RPP30P78346 268 aaKnown RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 GGNBP1Q5YKI7 109 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 C11orf45Q8TAV5 145 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 RAB40CQ96S21 281 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NRN1Q9NPD7 142 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 CLEC5AQ9NY25 188 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 FBXL17Q9UF56 701 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 PFDN2Q9UHV9 154 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 FLVCR2Q9UPI3 526 aa9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 KLK5Q9Y337 293 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-233ENST00000584186 C9orf170A2RU37 121 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NAP1L6A6NFF2 107 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SNRPGP15A8MWD9 76 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 H3BP45 60 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 ADAP1O75689 374 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NDUFB6O95139 128 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SPP1P10451 314 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 C4BPBP20851 252 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SPANXN5Q5MJ07 72 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 MORN3Q6PF18 240 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 LINC00476Q8WZB0 136 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 PPP1R14BQ96C90 147 aa9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 CIB3Q96Q77 187 aaPredicted RBP9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
CDK5RAP3-233ENST00000584186 CENPXA8MT69 81 aa9.93□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NUP62P37198 522 aaPredicted RBP9.93□□□□□ -0.82
CDK5RAP3-233ENST00000584186 UBE2MP61081 183 aaKnown RBP9.93□□□□□ -0.82
CDK5RAP3-233ENST00000584186 C4orf46Q504U0 113 aa9.93□□□□□ -0.82
CDK5RAP3-233ENST00000584186 OR8G2PQ6IF36 304 aa9.93□□□□□ -0.82
CDK5RAP3-233ENST00000584186 COQ8AQ8NI60 647 aa9.93□□□□□ -0.82
CDK5RAP3-233ENST00000584186 ANXA7P20073 488 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 TMEM41BQ5BJD5 291 aa9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 GSG1LQ6UXU4 331 aa9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 LINC00052Q96N35 136 aa9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 TRGV9Q99603 122 aa9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SDHCQ99643 169 aaPredicted RBP9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 MFFQ9GZY8 342 aa9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 STRAPQ9Y3F4 350 aaKnown RBP9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 AGRNO00468 2067 aa9.92□□□□□ -0.82
CDK5RAP3-233ENST00000584186 IGKV1OR2-108A0A075B7D4 117 aa9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SSSCA1O60232 199 aa9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 IFNA21P01568 189 aa9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 OR4E1P0C645 316 aa9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 POLR2GP62487 172 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 AKR1C1Q04828 323 aa9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 OR8I2Q8N0Y5 310 aa9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 WDR12Q9GZL7 423 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-233ENST00000584186 IGHV4-28A0A0C4DH34 117 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SMCO3A2RU48 225 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SCGB1D2O95969 90 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 IGKV3-20P01619 116 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 IL7P13232 177 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NKX2-1P43699 371 aaPredicted RBP9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 DEFB1P60022 68 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 NUTF2P61970 127 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 THAP8Q8NA92 274 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 Q8NAQ8 132 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 SEPSECSQ9HD40 501 aaKnown RBP9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 PSENENQ9NZ42 101 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 TBC1D24Q9ULP9 559 aa9.9□□□□□ -0.82
CDK5RAP3-233ENST00000584186 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
CDK5RAP3-233ENST00000584186 H3BMM0 161 aa9.89□□□□□ -0.83
CDK5RAP3-233ENST00000584186 RBMY1A1P0DJD3 496 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-233ENST00000584186 RBMY1CP0DJD4 496 aa9.89□□□□□ -0.83
CDK5RAP3-233ENST00000584186 MIFP14174 115 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms