RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 SUPT4H1P63272 117 aaKnown RBP3.51□□□□□ -1.85
SS18-223ENST00000583595 IHHQ14623 411 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 CEACAM21Q3KPI0 293 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 OR10J3Q5JRS4 329 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 ZNF684Q5T5D7 378 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 FAM78BQ5VT40 261 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 ZNF550Q7Z398 422 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 ZNF525Q8N782 197 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 ZFP62Q8NB50 900 aaPredicted RBP3.51□□□□□ -1.85
SS18-223ENST00000583595 OR5H2Q8NGV7 314 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 BLNKQ8WV28 456 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 BORCS7Q96B45 105 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 FLYWCH2Q96CP2 140 aaKnown RBP3.51□□□□□ -1.85
SS18-223ENST00000583595 SMIM7Q9BQ49 75 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 GNG13Q9P2W3 67 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 HSPB8Q9UJY1 196 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 TP53TG3Q9ULZ0 132 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 ZNF257Q9Y2Q1 563 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 POLR1DQ9Y2S0 133 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 WASHC3Q9Y3C0 194 aa3.51□□□□□ -1.85
SS18-223ENST00000583595 CHD3Q12873 2000 aaKnown RBP3.51□□□□□ -1.85
SS18-223ENST00000583595 PIKFYVEQ9Y2I7 2098 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 COL4A4P53420 1690 aaPredicted RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 TNRC18O15417 2968 aaPredicted RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 SPAARA0A1B0GVQ0 90 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 hADV38S2A0JD32 116 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 H0YJW9 148 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 GYPAP02724 150 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 TTRP02766 147 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 OR5AL1P0C617 328 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 PIRTP0C851 137 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 PSG2P11465 335 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 ZNF93P35789 620 aaPredicted RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 PFN3P60673 137 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 PRR3P79522 188 aaKnown RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 MEF2BQ02080 365 aaPredicted RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 FMODQ06828 376 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 HLA-DRB5Q30154 266 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 ZNF658BQ4V348 819 aaPredicted RBP3.5□□□□□ -1.85
SS18-223ENST00000583595 MPV17L2Q567V2 206 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 TMEM42Q69YG0 159 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 LCN15Q6UWW0 184 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 ACP7Q6ZNF0 438 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 Q6ZSR6 202 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 LHFPL1Q86WI0 220 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 SMIM20Q8N5G0 67 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 ZNF676Q8N7Q3 588 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 C20orf203Q8NBC4 194 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 OR2K2Q8NGT1 345 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 RAB8BQ92930 207 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 C16orf74Q96GX8 76 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 ABHD14BQ96IU4 210 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 KCNS1Q96KK3 526 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 PLEKHF2Q9H8W4 249 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 CKLFQ9UBR5 152 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 CYSLTR1Q9Y271 337 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 UFC1Q9Y3C8 167 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 PLXND1Q9Y4D7 1925 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 MYO10Q9HD67 2058 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 NUP210LQ5VU65 1888 aa3.5□□□□□ -1.85
SS18-223ENST00000583595 NINQ8N4C6 2090 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 IGKV1-8A0A0C4DH67 115 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 MUC21A0A0G2JKD1 596 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 MUC21A0A140T8X8 626 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 C7orf71A4D174 169 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 ZFP92A6NM28 416 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 CEBPZOSA8MTT3 80 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 M0R1B8 84 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 CDC42EP2O14613 210 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 ZNF324O75467 553 aaPredicted RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 CA2P00918 260 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 TNFP01375 233 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 IGKV1D-16P01601 117 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 ZNF728P0DKX0 622 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 ZNF17P17021 662 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 GRPRP30550 384 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 CD70P32970 193 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 TAS2R46P59540 309 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 PSG5Q15238 335 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 OR1Q1Q15612 314 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 RSPO1Q2MKA7 263 aaPredicted RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 HIGD2BQ4VC39 106 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 FAM78AQ5JUQ0 283 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 SLC25A34Q6PIV7 304 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 OLIG3Q7RTU3 272 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 TTC9CQ8N5M4 171 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 LINC01555Q8NAE3 123 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 SGMS2Q8NHU3 365 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 PPTC7Q8NI37 304 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 VSTM2AQ8TAG5 236 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 MRPL30Q8TCC3 161 aaKnown RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 C18orf32Q8TCD1 76 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 PTH2Q96A98 100 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 Q96M85 177 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 EFCAB11Q9BUY7 163 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 TTTY10Q9BZA0 68 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms