RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 FAM231AP0DMU4 169 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 FAM231CP0DMU5 169 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 DEFB131AP59861 70 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 RELQ04864 619 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-215ENST00000583328 GGNBP1Q5YKI7 109 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 C12orf45Q8N5I9 185 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-215ENST00000583328 OR1S1Q8NH92 325 aa8.92□□□□□ -0.98
TOP3A-215ENST00000583328 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 SNRPGP15A8MWD9 76 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 F8W735 103 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-215ENST00000583328 NUPL2O15504 423 aaKnown RBP8.91□□□□□ -0.98
TOP3A-215ENST00000583328 PITX3O75364 302 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 ADAP1O75689 374 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 CTSGP08311 255 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 MIFP14174 115 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 HOXA1P49639 335 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-215ENST00000583328 ERHP84090 104 aaKnown RBP8.91□□□□□ -0.98
TOP3A-215ENST00000583328 RGS21Q2M5E4 152 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 SPINK9Q5DT21 86 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 FAM90A2PQ658T7 463 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 TCF24Q7RTU0 167 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 ZNF575Q86XF7 245 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 STHQ8IWL8 128 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 ZNF114Q8NC26 417 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 ENY2Q9NPA8 101 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 HSPB7Q9UBY9 170 aa8.91□□□□□ -0.98
TOP3A-215ENST00000583328 F11RQ9Y624 299 aaKnown RBP8.91□□□□□ -0.98
TOP3A-215ENST00000583328 DEFB131BA0A096LNP1 70 aa8.9□□□□□ -0.98
TOP3A-215ENST00000583328 CEBPZOSA8MTT3 80 aa8.9□□□□□ -0.98
TOP3A-215ENST00000583328 FAM90A26D6RGX4 464 aa8.9□□□□□ -0.98
TOP3A-215ENST00000583328 K7EIM0 57 aa8.9□□□□□ -0.98
TOP3A-215ENST00000583328 DFFBO76075 338 aa8.9□□□□□ -0.98
TOP3A-215ENST00000583328 NDUFAF3Q9BU61 184 aa8.9□□□□□ -0.98
TOP3A-215ENST00000583328 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-215ENST00000583328 NXPH3O95157 252 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 AMBPP02760 352 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 CD5P06127 495 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 RPL11P62913 178 aaKnown RBP8.89□□□□□ -0.99
TOP3A-215ENST00000583328 TMEM41BQ5BJD5 291 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 OR1P1Q8NH06 330 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 OR10C1Q96KK4 312 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 MS4A6AQ9H2W1 248 aa8.89□□□□□ -0.99
TOP3A-215ENST00000583328 C7orf66A4D0T2 115 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 CCSO14618 274 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 MED6O75586 246 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 IFNA10P01566 189 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 GIG44P09565 113 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-215ENST00000583328 SNCAP37840 140 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 HTR2BP41595 481 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 SUB1P53999 127 aaKnown RBP eCLIP8.88□□□□□ -0.99
TOP3A-215ENST00000583328 MFAP4P55083 255 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 OXA1LQ15070 435 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 IAH1Q2TAA2 248 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-215ENST00000583328 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 DTD1Q8TEA8 209 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 ZNF414Q96IQ9 312 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 RBKSQ9H477 322 aa8.88□□□□□ -0.99
TOP3A-215ENST00000583328 HEYLQ9NQ87 328 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-215ENST00000583328 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 ZNF705EA8MWA4 302 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-215ENST00000583328 RNASE2P10153 161 aaKnown RBP8.87□□□□□ -0.99
TOP3A-215ENST00000583328 NPY1RP25929 384 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 BSXQ3C1V8 233 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 SOHLH1Q5JUK2 328 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-215ENST00000583328 UBE2DNLQ8IWF7 75 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 LILRB2Q8N423 598 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 FAM24BQ8N5W8 94 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 ZBTB8BQ8NAP8 495 aaPredicted RBP8.87□□□□□ -0.99
TOP3A-215ENST00000583328 SLC24A4Q8NFF2 622 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 OR4D5Q8NGN0 318 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 ST8SIA2Q92186 375 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 GINS3Q9BRX5 216 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 RABAC1Q9UI14 185 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 CELA1Q9UNI1 258 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 X6R8D5 127 aa8.87□□□□□ -0.99
TOP3A-215ENST00000583328 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 IGHV3-66A0A0C4DH42 116 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 C5orf51A6NDU8 294 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 FAM25EA8MYX2 175 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 CORTO00230 105 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 SYNGR2O43760 224 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 SSNA1O43805 119 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 SPP1P10451 314 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 NKX2-1P43699 371 aaPredicted RBP8.86□□□□□ -0.99
TOP3A-215ENST00000583328 ID3Q02535 119 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 GSG1LQ6UXU4 331 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 TRPT1Q86TN4 253 aaKnown RBP8.86□□□□□ -0.99
TOP3A-215ENST00000583328 NOXA1Q86UR1 476 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 C2orf50Q96LR7 162 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 CIB3Q96Q77 187 aaPredicted RBP8.86□□□□□ -0.99
TOP3A-215ENST00000583328 TXN2Q99757 166 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 VSIRQ9H7M9 311 aa8.86□□□□□ -0.99
TOP3A-215ENST00000583328 CLEC5AQ9NY25 188 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms