RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 ATG2BQ96BY7 2078 aa6.25□□□□□ -1.41
CMTM4-205ENST00000581487 IGHV3-49A0A0A0MS15 119 aa6.25□□□□□ -1.41
CMTM4-205ENST00000581487 IGHV5-10-1A0A0J9YXX1 117 aa6.25□□□□□ -1.41
CMTM4-205ENST00000581487 CELA2AP08217 269 aa6.25□□□□□ -1.41
CMTM4-205ENST00000581487 GCHFRP30047 84 aa6.25□□□□□ -1.41
CMTM4-205ENST00000581487 RPL15P61313 204 aaKnown RBP6.25□□□□□ -1.41
CMTM4-205ENST00000581487 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
CMTM4-205ENST00000581487 GAGE12HA6NDE8 117 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 F8VVB4 439 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 F8VWA3 439 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 DUSP14O95147 198 aaKnown RBP6.24□□□□□ -1.41
CMTM4-205ENST00000581487 IGHV3-53P01767 116 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 EVI2AP22794 236 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 UBE2E1P51965 193 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 C21orf62Q9NYP8 219 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 LSM4Q9Y4Z0 139 aaKnown RBP6.24□□□□□ -1.41
CMTM4-205ENST00000581487 IGFBP2P18065 325 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 CT55Q8WUE5 264 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 PCOLCEQ15113 449 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 ACTL10Q5JWF8 245 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 CRIPAKQ8N1N5 446 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 CHAC1Q9BUX1 264 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 SCRT2Q9NQ03 307 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 MAP1BP46821 2468 aaKnown RBP6.24□□□□□ -1.41
CMTM4-205ENST00000581487 A0A1B0GX51 115 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 LHX2P50458 406 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 BCL6BQ8N143 479 aaPredicted RBP6.24□□□□□ -1.41
CMTM4-205ENST00000581487 WNK3Q9BYP7 1800 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 MPZP25189 248 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 RPL31P62899 125 aaKnown RBP6.24□□□□□ -1.41
CMTM4-205ENST00000581487 KLRD1Q13241 179 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 TRIP6Q15654 476 aaKnown RBP6.24□□□□□ -1.41
CMTM4-205ENST00000581487 SIPA1L1O43166 1804 aa6.24□□□□□ -1.41
CMTM4-205ENST00000581487 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 F5H768 121 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 CFHR1Q03591 330 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 TPRX1Q8N7U7 411 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 RNASE7Q9H1E1 156 aaKnown RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 FBLN5Q9UBX5 448 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 PIKFYVEQ9Y2I7 2098 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 IGHV3OR16-13A0A075B7E8 117 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 IGHV3-74A0A0B4J1X5 117 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 TIRAPP58753 221 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 SLAQ13239 276 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 PMVKQ15126 192 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 PTPRFP10586 1907 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 SPAG17Q6Q759 2223 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 CA7P43166 264 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 LCN12Q6JVE5 192 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 IGHV3-73A0A0B4J1V6 119 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 K7EP13 123 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 GATA4P43694 442 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 CD177Q8N6Q3 437 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 TM2D1Q9BX74 207 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 GNB1LQ9BYB4 327 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 H0Y9J4 135 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 PFN1P07737 140 aaKnown RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 COQ2Q96H96 371 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 SCN3AQ9NY46 2000 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 PTPRZ1P23471 2315 aaPredicted RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 PRR33A8MZF0 331 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 OR2H2O95918 312 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 EFEMP2O95967 443 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 SLC25A16P16260 332 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 MRPL14Q6P1L8 145 aaKnown RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 DMRTC2Q8IXT2 367 aaPredicted RBP6.23□□□□□ -1.41
CMTM4-205ENST00000581487 FGFRL1Q8N441 504 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 GCSAMQ8N6F7 178 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 GDF15Q99988 308 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 ARID1AO14497 2285 aa6.23□□□□□ -1.41
CMTM4-205ENST00000581487 IGKCP01834 107 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 PAQR4Q8N4S7 273 aaPredicted RBP6.22□□□□□ -1.41
CMTM4-205ENST00000581487 FLVCR1-AS1Q8TAF5 88 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 FGF11Q92914 225 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 PRSS22Q9GZN4 317 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 NPIPB11E5RHQ5 1161 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 ZIC3O60481 467 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 OR11H6Q8NGC7 330 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 TMEM54Q969K7 222 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 RCHY1Q96PM5 261 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 PILRBQ9UKJ0 227 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 FAM90A26D6RGX4 464 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 ZG16O60844 167 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 GATA2P23769 480 aaPredicted RBP6.22□□□□□ -1.41
CMTM4-205ENST00000581487 GUSBP1Q15486 140 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 FBXW9Q5XUX1 488 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 NEGR1Q7Z3B1 354 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 LRCOL1A6NCL2 159 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 CGAP01215 116 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 CDKN1AP38936 164 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 PPP1R32Q7Z5V6 425 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
CMTM4-205ENST00000581487 DAD1P61803 113 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms