RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 NDUFAF3Q9BU61 184 aa7.6□□□□□ -1.19
RFFL-209ENST00000581265 NAA50Q9GZZ1 169 aaKnown RBP7.6□□□□□ -1.19
RFFL-209ENST00000581265 MIXL1Q9H2W2 232 aa7.6□□□□□ -1.19
RFFL-209ENST00000581265 U3KQ87 197 aa7.6□□□□□ -1.19
RFFL-209ENST00000581265 SMIM9A6NGZ8 99 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 ZNF705FA8MVS1 300 aaPredicted RBP7.59□□□□□ -1.19
RFFL-209ENST00000581265 DISC1C4P0D8 188 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 ZNF705DP0CH99 300 aaPredicted RBP7.59□□□□□ -1.19
RFFL-209ENST00000581265 ZNF705BP0CI00 300 aaPredicted RBP7.59□□□□□ -1.19
RFFL-209ENST00000581265 SULT1A3P0DMM9 295 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 SULT1A4P0DMN0 295 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 HLA-DRB4P13762 266 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 ATP5IP56385 69 aaPredicted RBP7.59□□□□□ -1.19
RFFL-209ENST00000581265 KLF9Q13886 244 aaPredicted RBP7.59□□□□□ -1.19
RFFL-209ENST00000581265 FAAP20Q6NZ36 180 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 ZNF767PQ75MW2 155 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 OR51G1Q8NGK1 321 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 IL22RA2Q969J5 263 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 ACY3Q96HD9 319 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 CLUHP3Q96NS8 147 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 SCRT1Q9BWW7 348 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 KCNIP3Q9Y2W7 256 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 HLA-DRB4X5D2U9 266 aa7.59□□□□□ -1.19
RFFL-209ENST00000581265 MUC4Q99102 2169 aa7.59□□□□□ -1.2
RFFL-209ENST00000581265 TMEM189A5PLL7 270 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 CTDSP2O14595 271 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 IFNA10P01566 189 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 SPART-AS1P0CW21 52 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 NUP62P37198 522 aaPredicted RBP7.58□□□□□ -1.2
RFFL-209ENST00000581265 LGALS9BQ3B8N2 356 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 SMIM4Q8WVI0 70 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 RNF125Q96EQ8 232 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 FAM210BQ96KR6 192 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 PRRT1Q99946 306 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 HSPB7Q9UBY9 170 aa7.58□□□□□ -1.2
RFFL-209ENST00000581265 A0A0B4J2A0 478 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 CTDSPLO15194 276 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 RTL8CO15255 209 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 RGS5O15539 181 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 AKAIN1P0CW23 69 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 GPX4P36969 197 aaPredicted RBP7.57□□□□□ -1.2
RFFL-209ENST00000581265 CCR6P51684 374 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 C1orf194Q5T5A4 169 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 OR8G2PQ6IF36 304 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 FOXI2Q6ZQN5 318 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 LGI3Q8N145 548 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 MAPKAPK5-AS1Q8N8E1 139 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 OR51S1Q8NGJ8 323 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 OR4C16Q8NGL9 310 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 WDR12Q9GZL7 423 aaKnown RBP7.57□□□□□ -1.2
RFFL-209ENST00000581265 SAV1Q9H4B6 383 aaPredicted RBP7.57□□□□□ -1.2
RFFL-209ENST00000581265 SHPKQ9UHJ6 478 aa7.57□□□□□ -1.2
RFFL-209ENST00000581265 IGKV1D-37A0A075B6S9 117 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 SNRPGP15A8MWD9 76 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 SOCS3O14543 225 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 ID1P41134 155 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 PSMB3P49720 205 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 DEFB1P60022 68 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 GAMTQ14353 236 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 SMCO1Q147U7 214 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 SPATA31B1PQ5VZV4 182 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 ZNF709Q8N972 641 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 DTD1Q8TEA8 209 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 LINC00052Q96N35 136 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 SCGB3A2Q96PL1 93 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 PBDC1Q9BVG4 233 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
RFFL-209ENST00000581265 DKK2Q9UBU2 259 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 RFNGQ9Y644 331 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 DNAH17Q9UFH2 4485 aa7.56□□□□□ -1.2
RFFL-209ENST00000581265 TEX48A0A1B0GUV7 120 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 ZFP92A6NM28 416 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 M0R2N4 97 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 IFNA21P01568 189 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 IGKV3-20P01619 116 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 SMIM18P0DKX4 95 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 EMP1P54849 157 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 PAX9P55771 341 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 SUPT4H1P63272 117 aaKnown RBP7.55□□□□□ -1.2
RFFL-209ENST00000581265 ZNF90Q03938 601 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 OXA1LQ15070 435 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 ZNF79Q15937 498 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 Q6ZR54 194 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 LYZL2Q7Z4W2 148 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 CLVS1Q8IUQ0 354 aaPredicted RBP7.55□□□□□ -1.2
RFFL-209ENST00000581265 DIRAS2Q96HU8 199 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 NIPSNAP3BQ9BS92 247 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 RBKSQ9H477 322 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 DNAH2Q9P225 4427 aa7.55□□□□□ -1.2
RFFL-209ENST00000581265 IGHV3OR16-12A0A075B7B8 117 aa7.54□□□□□ -1.2
RFFL-209ENST00000581265 ANKRD20A5PA0PJZ0 165 aa7.54□□□□□ -1.2
RFFL-209ENST00000581265 ISLRO14498 428 aa7.54□□□□□ -1.2
RFFL-209ENST00000581265 FABP1P07148 127 aa7.54□□□□□ -1.2
RFFL-209ENST00000581265 FXYD7P58549 80 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms