RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ZNF90Q03938 601 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 OR2F1Q13607 317 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 CNPY1Q3B7I2 92 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 C16orf54Q6UWD8 224 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 Q6ZWC4 215 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 KIR2DL5AQ8N109 375 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 KIR2DL5BQ8NHK3 375 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 RNF125Q96EQ8 232 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 C20orf85Q9H1P6 137 aa12.28□□□□□ -0.44
SREBF1-219ENST00000580540 STRAPQ9Y3F4 350 aaKnown RBP12.28□□□□□ -0.44
SREBF1-219ENST00000580540 TRAV6A0A075B6T7 132 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 HELTA6NFD8 242 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 SCGB1D2O95969 90 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 FABP1P07148 127 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 ZNF688P0C7X2 276 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-219ENST00000580540 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
SREBF1-219ENST00000580540 IGKV1D-37A0A075B6S9 117 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 K7EQG2 157 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 SSSCA1O60232 199 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 TCRBP04435 133 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 AP2S1P53680 142 aaPredicted RBP12.26□□□□□ -0.45
SREBF1-219ENST00000580540 LYZP61626 148 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 ID3Q02535 119 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 IL17DQ8TAD2 202 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 GLMPQ8WWB7 406 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 CCDC32Q9BV29 185 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
SREBF1-219ENST00000580540 SNRPGP15A8MWD9 76 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 IAH1Q2TAA2 248 aaPredicted RBP12.25□□□□□ -0.45
SREBF1-219ENST00000580540 STHQ8IWL8 128 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 OR4D5Q8NGN0 318 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 PPP1R14BQ96C90 147 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 RNF183Q96D59 192 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 PFDN2Q9UHV9 154 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 TP53TG1Q9Y2A0 90 aa12.25□□□□□ -0.45
SREBF1-219ENST00000580540 A0A0J9YWU9 116 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 SMCO3A2RU48 225 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 KNCNA6PVL3 124 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 BUB3O43684 328 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 SIGLEC15Q6ZMC9 328 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 DCANP1Q8TF63 244 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 S100ZQ8WXG8 99 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 TRGV9Q99603 122 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 NUDT15Q9NV35 164 aa12.24□□□□□ -0.45
SREBF1-219ENST00000580540 FAM240BA0A1B0GVZ2 78 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 FAM25EA8MYX2 175 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 CCSO14618 274 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 CA1P00915 261 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-219ENST00000580540 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 OR8G2PQ6IF36 304 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 THAP8Q8NA92 274 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 ZBTB8BQ8NAP8 495 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-219ENST00000580540 SEC22CQ9BRL7 303 aa12.23□□□□□ -0.45
SREBF1-219ENST00000580540 DYNC2H1Q8NCM8 4307 aaKnown RBP12.22□□□□□ -0.45
SREBF1-219ENST00000580540 IGKV1OR2-108A0A075B7D4 117 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 A6NHS1 94 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 PRSS46E5RG02 174 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 H2AFB2P0C5Z0 115 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 NUP62P37198 522 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-219ENST00000580540 ZNF846Q147U1 533 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 ACTL10Q5JWF8 245 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 MZT2BQ6NZ67 158 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 ACOT7LQ6ZUV0 252 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 RYR3Q15413 4870 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 STARD9Q9P2P6 4700 aa12.22□□□□□ -0.45
SREBF1-219ENST00000580540 GATA2P23769 480 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-219ENST00000580540 RRAS2P62070 204 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-219ENST00000580540 LINC00299Q6ZSB3 139 aa12.21□□□□□ -0.45
SREBF1-219ENST00000580540 ZNF431Q8TF32 576 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-219ENST00000580540 AGRNO00468 2067 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 C5orf51A6NDU8 294 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 CCNKO75909 580 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 METTL15P1P0C7V9 234 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
SREBF1-219ENST00000580540 PMS2P11Q13670 270 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 BPIFCQ8NFQ6 507 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 RAB40CQ96S21 281 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 RARRES2Q99969 163 aa12.2□□□□□ -0.46
SREBF1-219ENST00000580540 CXorf65A6NEN9 183 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 CFDP00746 253 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-219ENST00000580540 ORM2P19652 201 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 PAX9P55771 341 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 GSG1LQ6UXU4 331 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 OR8I2Q8N0Y5 310 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 C12orf45Q8N5I9 185 aaPredicted RBP12.19□□□□□ -0.46
SREBF1-219ENST00000580540 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 GATAD1Q8WUU5 269 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 LINC00052Q96N35 136 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 FBXL17Q9UF56 701 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 TBC1D24Q9ULP9 559 aa12.19□□□□□ -0.46
SREBF1-219ENST00000580540 RCL1Q9Y2P8 373 aaKnown RBP12.19□□□□□ -0.46
SREBF1-219ENST00000580540 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
SREBF1-219ENST00000580540 L7N2F9 121 aa12.18□□□□□ -0.46
SREBF1-219ENST00000580540 MBPP02686 304 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms