RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ZNF846Q147U1 533 aa18.45■□□□□ 0.54
CDC42EP4-205ENST00000580315 SPANXN5Q5MJ07 72 aa18.45■□□□□ 0.54
CDC42EP4-205ENST00000580315 MS4A6AQ9H2W1 248 aa18.45■□□□□ 0.54
CDC42EP4-205ENST00000580315 STRAPQ9Y3F4 350 aaKnown RBP18.45■□□□□ 0.54
CDC42EP4-205ENST00000580315 TRAV2A0A0B4J234 112 aa18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 FAM240BA0A1B0GVZ2 78 aa18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 APOC4P55056 127 aa18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 POLR2GP62487 172 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 IAH1Q2TAA2 248 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 WFDC3Q8IUB2 231 aa18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 OR4D5Q8NGN0 318 aa18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 BATF3Q9NR55 127 aa18.44■□□□□ 0.54
CDC42EP4-205ENST00000580315 H2AFB2P0C5Z0 115 aa18.43■□□□□ 0.54
CDC42EP4-205ENST00000580315 PSG1P11464 419 aa18.43■□□□□ 0.54
CDC42EP4-205ENST00000580315 OR51G1Q8NGK1 321 aa18.43■□□□□ 0.54
CDC42EP4-205ENST00000580315 RETNQ9HD89 108 aa18.43■□□□□ 0.54
CDC42EP4-205ENST00000580315 RABAC1Q9UI14 185 aa18.43■□□□□ 0.54
CDC42EP4-205ENST00000580315 HELTA6NFD8 242 aa18.42■□□□□ 0.54
CDC42EP4-205ENST00000580315 H3BP45 60 aa18.42■□□□□ 0.54
CDC42EP4-205ENST00000580315 ASAH1Q13510 395 aa18.42■□□□□ 0.54
CDC42EP4-205ENST00000580315 USF2Q15853 346 aaPredicted RBP18.42■□□□□ 0.54
CDC42EP4-205ENST00000580315 PFDN2Q9UHV9 154 aa18.42■□□□□ 0.54
CDC42EP4-205ENST00000580315 U3KQE9 123 aa18.42■□□□□ 0.54
CDC42EP4-205ENST00000580315 SSSCA1O60232 199 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 SCGB1D2O95969 90 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 APRG1Q8IVJ8 170 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 ZBTB8BQ8NAP8 495 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 STXBP6Q8NFX7 210 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 ZNF431Q8TF32 576 aaPredicted RBP18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 RNF125Q96EQ8 232 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 MAP6D1Q9H9H5 199 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 PSENENQ9NZ42 101 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 GSKIPQ9P0R6 139 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 TBC1D24Q9ULP9 559 aa18.41■□□□□ 0.54
CDC42EP4-205ENST00000580315 JTBO76095 146 aa18.4■□□□□ 0.54
CDC42EP4-205ENST00000580315 NUP62P37198 522 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP4-205ENST00000580315 AP2S1P53680 142 aaPredicted RBP18.4■□□□□ 0.54
CDC42EP4-205ENST00000580315 TRGV9Q99603 122 aa18.4■□□□□ 0.54
CDC42EP4-205ENST00000580315 PBDC1Q9BVG4 233 aa18.4■□□□□ 0.54
CDC42EP4-205ENST00000580315 IGKV1D-37A0A075B6S9 117 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 KIR2DL5BA0A0G2JN68 375 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 KIR2DL5BA0A0G2JPC4 375 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 UBE2CO00762 179 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 UPK1BO75841 260 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 ZNF90Q03938 601 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 C16orf54Q6UWD8 224 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 KIR2DL5AQ8N109 375 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 STPG3Q8N7X2 389 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 KIR2DL5BQ8NHK3 375 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 SMIM8Q96KF7 97 aa18.39■□□□□ 0.53
CDC42EP4-205ENST00000580315 SNRPGP15A8MWD9 76 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 PRSS46E5RG02 174 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 RPL35AP18077 110 aaKnown RBP18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 OR8G2PQ6IF36 304 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 THAP8Q8NA92 274 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 IL17DQ8TAD2 202 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 RAB40CQ96S21 281 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 SEC22CQ9BRL7 303 aa18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 PLECQ15149 4684 aaKnown RBP18.38■□□□□ 0.53
CDC42EP4-205ENST00000580315 AKR1C1Q04828 323 aa18.37■□□□□ 0.53
CDC42EP4-205ENST00000580315 C12orf45Q8N5I9 185 aaPredicted RBP18.37■□□□□ 0.53
CDC42EP4-205ENST00000580315 ENKURQ8TC29 256 aa18.37■□□□□ 0.53
CDC42EP4-205ENST00000580315 GLMPQ8WWB7 406 aa18.37■□□□□ 0.53
CDC42EP4-205ENST00000580315 FAM25EA8MYX2 175 aa18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 BUB3O43684 328 aa18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 CFDP00746 253 aaPredicted RBP18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 DEFB131AP59861 70 aa18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 LYZP61626 148 aa18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 ACOT7LQ6ZUV0 252 aa18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 Q6ZWC4 215 aa18.36■□□□□ 0.53
CDC42EP4-205ENST00000580315 K7EQG2 157 aa18.35■□□□□ 0.53
CDC42EP4-205ENST00000580315 CCSO14618 274 aa18.35■□□□□ 0.53
CDC42EP4-205ENST00000580315 TAS2R30P59541 319 aa18.35■□□□□ 0.53
CDC42EP4-205ENST00000580315 OR2F1Q13607 317 aa18.35■□□□□ 0.53
CDC42EP4-205ENST00000580315 ZNF124Q15973 351 aa18.35■□□□□ 0.53
CDC42EP4-205ENST00000580315 IGKV1OR2-108A0A075B7D4 117 aa18.34■□□□□ 0.53
CDC42EP4-205ENST00000580315 C5orf51A6NDU8 294 aa18.34■□□□□ 0.53
CDC42EP4-205ENST00000580315 TSC22D2O75157 780 aa18.34■□□□□ 0.53
CDC42EP4-205ENST00000580315 SIGLEC15Q6ZMC9 328 aa18.34■□□□□ 0.53
CDC42EP4-205ENST00000580315 OVOL2Q9BRP0 275 aa18.34■□□□□ 0.53
CDC42EP4-205ENST00000580315 TP53TG1Q9Y2A0 90 aa18.34■□□□□ 0.53
CDC42EP4-205ENST00000580315 SMCO3A2RU48 225 aa18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 MBPP02686 304 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 PAX9P55771 341 aa18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 FAM24BQ8N5W8 94 aa18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 DCANP1Q8TF63 244 aa18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 PPP1R14BQ96C90 147 aa18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 RCL1Q9Y2P8 373 aaKnown RBP18.33■□□□□ 0.52
CDC42EP4-205ENST00000580315 L7N2F9 121 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 SPRY2O43597 315 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 IL5P05113 134 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 VAMP2P63027 116 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 LEMD1Q68G75 181 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 TMEM14EPQ6UXP3 125 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 TMEM144Q7Z5S9 345 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 BPIFCQ8NFQ6 507 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 CSTL1Q9H114 145 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 FBXL17Q9UF56 701 aa18.32■□□□□ 0.52
CDC42EP4-205ENST00000580315 METTL15P1P0C7V9 234 aa18.31■□□□□ 0.52
CDC42EP4-205ENST00000580315 ZNF688P0C7X2 276 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms