RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IGHV7-4-1A0A0J9YVY3 117 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 PMS2P5A8MQ11 134 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 H3BP45 60 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 GOSR2O14653 212 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 SSSCA1O60232 199 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 SCGB2A1O75556 95 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 SCGB1D2O95969 90 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 FCGR2BP31994 310 aaPredicted RBP9.86□□□□□ -0.83
TRAF4-214ENST00000580073 SUB1P53999 127 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRAF4-214ENST00000580073 MFAP4P55083 255 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 H2BFSP57053 126 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 RGS21Q2M5E4 152 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 C11orf45Q8TAV5 145 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 CACFD1Q9UGQ2 172 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 SMPXQ9UHP9 88 aa9.86□□□□□ -0.83
TRAF4-214ENST00000580073 K7EPK0 472 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 MED6O75586 246 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 YIF1AO95070 293 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 EWSR1Q01844 656 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAF4-214ENST00000580073 RAB32Q13637 225 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 PRSS54Q6PEW0 395 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 GSG1LQ6UXU4 331 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 SMIM8Q96KF7 97 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 RHPN1-AS1Q9BWJ2 59 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 TMEM231Q9H6L2 316 aa9.85□□□□□ -0.83
TRAF4-214ENST00000580073 TRAV14DV4A0A0A6YYC5 116 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 H0YIZ8 118 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 CHEK1O14757 476 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 ZNF207O43670 478 aaKnown RBP9.84□□□□□ -0.83
TRAF4-214ENST00000580073 GNG7O60262 68 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 DFFBO76075 338 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 CXCL3P19876 107 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 OPRK1P41145 380 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 ARL16Q0P5N6 197 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 TMEM41BQ5BJD5 291 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 SPANXN5Q5MJ07 72 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 OR4X1Q8NH49 305 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 RNASEH2CQ8TDP1 164 aaKnown RBP9.84□□□□□ -0.83
TRAF4-214ENST00000580073 C2CD4CQ8TF44 421 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 RNF2Q99496 336 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 PSENENQ9NZ42 101 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 FBXL17Q9UF56 701 aa9.84□□□□□ -0.83
TRAF4-214ENST00000580073 LSM5Q9Y4Y9 91 aaKnown RBP9.84□□□□□ -0.83
TRAF4-214ENST00000580073 IGHV3OR16-8A0A075B7F1 116 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 TRAV2A0A0B4J234 112 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 C11orf94C9JXX5 98 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 CORTO00230 105 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 SSNA1O43805 119 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 CLN5O75503 358 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 IGKV1-17P01599 117 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 FCN2Q15485 313 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 TMEM14EPQ6UXP3 125 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 APRG1Q8IVJ8 170 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 RPP25LQ8N5L8 163 aaKnown RBP9.83□□□□□ -0.84
TRAF4-214ENST00000580073 OR11H7Q8NGC8 314 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 OR11H2Q8NH07 326 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 NPIPB3Q92617 1050 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 CIB3Q96Q77 187 aaPredicted RBP9.83□□□□□ -0.84
TRAF4-214ENST00000580073 MGAT4CQ9UBM8 478 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 FRAS1Q86XX4 4008 aa9.83□□□□□ -0.84
TRAF4-214ENST00000580073 IGKV1D-37A0A075B6S9 117 aa9.82□□□□□ -0.84
TRAF4-214ENST00000580073 DNASE2O00115 360 aaPredicted RBP9.82□□□□□ -0.84
TRAF4-214ENST00000580073 CA1P00915 261 aaPredicted RBP9.82□□□□□ -0.84
TRAF4-214ENST00000580073 NPBWR1P48145 328 aa9.82□□□□□ -0.84
TRAF4-214ENST00000580073 TFPI2P48307 235 aa9.82□□□□□ -0.84
TRAF4-214ENST00000580073 RND2P52198 227 aa9.82□□□□□ -0.84
TRAF4-214ENST00000580073 GAMTQ14353 236 aa9.82□□□□□ -0.84
TRAF4-214ENST00000580073 TIGITQ495A1 244 aa9.82□□□□□ -0.84
TRAF4-214ENST00000580073 NARS2Q96I59 477 aaKnown RBP9.82□□□□□ -0.84
TRAF4-214ENST00000580073 PAIP2BQ9ULR5 123 aaKnown RBP9.82□□□□□ -0.84
TRAF4-214ENST00000580073 IGKV1OR2-108A0A075B7D4 117 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 FAM24AA6NFZ4 105 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 METTL15P1P0C7V9 234 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 IGLC1P0CG04 106 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
TRAF4-214ENST00000580073 TAS2R30P59541 319 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 TCF24Q7RTU0 167 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 STHQ8IWL8 128 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 RAB40CQ96S21 281 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 RNF126Q9BV68 326 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 NMES1Q9C002 83 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 ZFAND3Q9H8U3 227 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 OR5AC2Q9NZP5 309 aa9.81□□□□□ -0.84
TRAF4-214ENST00000580073 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
TRAF4-214ENST00000580073 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 RPS10-NUDT3A0A1W2PQS6 291 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 A0A1W2PS18 150 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 TSC22D2O75157 780 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 DEDDO75618 318 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 SLC25A4P12235 298 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 GPX4P36969 197 aaPredicted RBP9.8□□□□□ -0.84
TRAF4-214ENST00000580073 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
TRAF4-214ENST00000580073 S100A10P60903 97 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 TOMM20LQ6UXN7 152 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 NOXA1Q86UR1 476 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 ACY3Q96HD9 319 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 HRH4Q9H3N8 390 aa9.8□□□□□ -0.84
TRAF4-214ENST00000580073 IGSF23A1L1A6 192 aa9.79□□□□□ -0.84
TRAF4-214ENST00000580073 SPP1P10451 314 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms