RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 UCP1P25874 307 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 SPCS3P61009 180 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 TIGITQ495A1 244 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 SCGB2B2Q4G0G5 96 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 TERB2Q8NHR7 220 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 AP3S1Q92572 193 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 Q9H8V8 135 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 EXTL2Q9UBQ6 330 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 MTFP1Q9UDX5 166 aa9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 YTHDF2Q9Y5A9 579 aaKnown RBP9.23□□□□□ -0.93
CDK5RAP3-213ENST00000579605 HELTA6NFD8 242 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 HTR2BP41595 481 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 HAMPP81172 84 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 OXA1LQ15070 435 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 TMEM229BQ8NBD8 167 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 SYT8Q8NBV8 401 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 OR1S2Q8NGQ3 325 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 Q8WTZ3 238 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 C15orf40Q8WUR7 153 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
CDK5RAP3-213ENST00000579605 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 H3BMM0 161 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 RAB3DO95716 219 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 IGKV1-17P01599 117 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 ZNF182P17025 639 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 TAS2R19P59542 299 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 CLINT1Q14677 625 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 BSXQ3C1V8 233 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 SSX7Q7RTT5 188 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 FAM219AQ8IW50 185 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 OR4D10Q8NGI6 311 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 OR52E5Q8NH55 327 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 MARCH1Q8TCQ1 289 aa9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 HEYLQ9NQ87 328 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.21□□□□□ -0.94
CDK5RAP3-213ENST00000579605 TEX13DA0A0J9YY54 714 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 CEBPZOSA8MTT3 80 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 F5H768 121 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 OR5AC1P0C628 307 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 SLC25A4P12235 298 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 OR10J1P30954 320 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 RND2P52198 227 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 AP2S1P53680 142 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 STEAP1BQ6NZ63 245 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 Q6ZSN1 163 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 RNASEH2CQ8TDP1 164 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 ABHD1Q96SE0 405 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 C14orf166Q9Y224 244 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 U3KQE9 123 aa9.2□□□□□ -0.94
CDK5RAP3-213ENST00000579605 CDS2O95674 445 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 HBE1P02100 147 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 IGLC1P0CG04 106 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 DEFB1P60022 68 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 KRTAP10-1P60331 282 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 YPEL3P61236 119 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 DHODHQ02127 395 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 C2orf83Q53S99 150 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 ETFRF1Q6IPR1 90 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 PRSS54Q6PEW0 395 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 SLC24A4Q8NFF2 622 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GLMPQ8WWB7 406 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 RBPMSQ93062 196 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GPR146Q96CH1 333 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 C7orf50Q9BRJ6 194 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 TMEM222Q9H0R3 208 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 CACNG5Q9UF02 275 aa9.19□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GABARAPH6UMI1 98 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GABARAPO95166 117 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 IFNA5P01569 189 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 IL4P05112 153 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 DEFB130BP0DP73 79 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 DEFB130AP0DP74 79 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 SNRPD3P62318 126 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 ICAM4Q14773 271 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 MEF2DQ14814 521 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 AARDQ4LEZ3 155 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 NOXA1Q86UR1 476 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 SELENOHQ8IZQ5 122 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 LHFPL5Q8TAF8 219 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GLYATL2Q8WU03 294 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 RTBDNQ9BSG5 229 aaPredicted RBP9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 NAA50Q9GZZ1 169 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 ZNF586Q9NXT0 402 aa9.18□□□□□ -0.94
CDK5RAP3-213ENST00000579605 DISC1C4P0D8 188 aa9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GSTZ1O43708 216 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 RD3LP0DJH9 198 aa9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 USF2Q15853 346 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 CTF1Q16619 201 aa9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 TMEM268Q5VZI3 342 aa9.17□□□□□ -0.94
CDK5RAP3-213ENST00000579605 FAAP20Q6NZ36 180 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms