RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 DEFB1P60022 68 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 SPATA31B1PQ5VZV4 182 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 TMEM88Q6PEY1 159 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 NOXA1Q86UR1 476 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 C15orf53Q8NAA6 179 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 OR51G1Q8NGK1 321 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 OR13C8Q8NGS7 320 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 TERB2Q8NHR7 220 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 TMEM170AQ8WVE7 144 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 RBPMSQ93062 196 aaKnown RBP6.06□□□□□ -1.44
CASC3-206ENST00000579238 ACY3Q96HD9 319 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 LINC00052Q96N35 136 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 TMEM222Q9H0R3 208 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 CACNG5Q9UF02 275 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 TMED3Q9Y3Q3 217 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 NACAE9PAV3 2078 aa6.06□□□□□ -1.44
CASC3-206ENST00000579238 LOC102723971A0A1B0GUV8 181 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 HPGDSO60760 199 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 ATP6V1G2O95670 118 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 OR5AC1P0C628 307 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 DAD1P61803 113 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 PSG9Q00887 426 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 TNP2Q05952 138 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 ZNF79Q15937 498 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 RRN3P1Q2M238 152 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 RNASE12Q5GAN4 147 aaKnown RBP6.05□□□□□ -1.44
CASC3-206ENST00000579238 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 C1orf158Q8N1D5 194 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 OR4B1Q8NGF8 309 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 OR52I2Q8NH67 350 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 COQ8AQ8NI60 647 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 LHFPL5Q8TAF8 219 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 GPR146Q96CH1 333 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 RNF125Q96EQ8 232 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 ABHD1Q96SE0 405 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 C7orf50Q9BRJ6 194 aaKnown RBP6.05□□□□□ -1.44
CASC3-206ENST00000579238 WDR12Q9GZL7 423 aaKnown RBP6.05□□□□□ -1.44
CASC3-206ENST00000579238 SLC35B3Q9H1N7 401 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 MTFP1Q9UDX5 166 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 CACFD1Q9UGQ2 172 aa6.05□□□□□ -1.44
CASC3-206ENST00000579238 YTHDF2Q9Y5A9 579 aaKnown RBP6.05□□□□□ -1.44
CASC3-206ENST00000579238 TEX13DA0A0J9YY54 714 aaPredicted RBP6.04□□□□□ -1.44
CASC3-206ENST00000579238 FAM25AB3EWG3 89 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 FAM25CB3EWG5 89 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 FAM25GB3EWG6 89 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 SOCS3O14543 225 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 ALDH3B2P48448 385 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 RORCP51449 518 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 PAX9P55771 341 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 SUPT4H1P63272 117 aaKnown RBP6.04□□□□□ -1.44
CASC3-206ENST00000579238 SCGB2B2Q4G0G5 96 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 NMSQ5H8A3 153 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 C1orf194Q5T5A4 169 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 EBLN2Q6P2I7 272 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 GSG1LQ6UXU4 331 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 SELENOHQ8IZQ5 122 aaKnown RBP6.04□□□□□ -1.44
CASC3-206ENST00000579238 MAPKAPK5-AS1Q8N8E1 139 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 TMEM229BQ8NBD8 167 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 OR4D10Q8NGI6 311 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 MARCH1Q8TCQ1 289 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 ATG101Q9BSB4 218 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 PBDC1Q9BVG4 233 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 NAA60Q9H7X0 242 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 VCX3AQ9NNX9 186 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 C14orf166Q9Y224 244 aaKnown RBP6.04□□□□□ -1.44
CASC3-206ENST00000579238 U3KQ87 197 aa6.04□□□□□ -1.44
CASC3-206ENST00000579238 ISLRO14498 428 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 TNFAIP8O95379 198 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 RAB3DO95716 219 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 TAS2R19P59542 299 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 NCS1P62166 190 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 KLF9Q13886 244 aaPredicted RBP6.03□□□□□ -1.44
CASC3-206ENST00000579238 FAM78BQ5VT40 261 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 SAMD13Q5VXD3 122 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 TMEM268Q5VZI3 342 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 STEAP1BQ6NZ63 245 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 C6orf223Q8N319 242 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 RTBDNQ9BSG5 229 aaPredicted RBP6.03□□□□□ -1.44
CASC3-206ENST00000579238 MAGT1Q9H0U3 335 aa6.03□□□□□ -1.44
CASC3-206ENST00000579238 IGKV1D-37A0A075B6S9 117 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 A0A087WXM4 84 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 A0A0J9YX75 114 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 NBDYA0A0U1RRE5 68 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 CRYM-AS1A6NIL9 109 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 ZFP92A6NM28 416 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 LYRM9A8MSI8 78 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 A8MTW9 85 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 F6UB75 175 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 FABP1P07148 127 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 SULT1A3P0DMM9 295 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 SULT1A4P0DMN0 295 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 GPX4P36969 197 aaPredicted RBP6.02□□□□□ -1.45
CASC3-206ENST00000579238 LYZP61626 148 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 VBP1P61758 197 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 ZNF90Q03938 601 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 MEF2DQ14814 521 aa6.02□□□□□ -1.45
CASC3-206ENST00000579238 SURF2Q15527 256 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms