RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DEFA5Q01523 94 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF90Q03938 601 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 RELQ04864 619 aaPredicted RBP10.4□□□□□ -0.74
SRSF1-202ENST00000578430 KIAA0141Q14154 515 aaPredicted RBP10.4□□□□□ -0.74
SRSF1-202ENST00000578430 TIGITQ495A1 244 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 CLLU1Q5K131 121 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 FAM74A1Q5RGS3 127 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 CLEC19AQ6UXS0 136 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 S100A7AQ86SG5 101 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF491Q8N8L2 437 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 OR5AU1Q8NGC0 362 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 OR51G1Q8NGK1 321 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 GATAD1Q8WUU5 269 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 PFDN5Q99471 154 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 RPRMQ9NS64 109 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 S4R3C0 116 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 ATRQ13535 2644 aa10.4□□□□□ -0.74
SRSF1-202ENST00000578430 ZNF705EA8MWA4 302 aaPredicted RBP10.39□□□□□ -0.75
SRSF1-202ENST00000578430 YIF1AO95070 293 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 OR2C1O95371 312 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 IGHV3-23P01764 117 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 PSG1P11464 419 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 GPR183P32249 361 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 OR10G4Q8NGN3 311 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 OR10G9Q8NGN4 311 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 OR10G7Q8NGN6 311 aa10.39□□□□□ -0.75
SRSF1-202ENST00000578430 ACTR3CQ9C0K3 210 aaPredicted RBP10.39□□□□□ -0.75
SRSF1-202ENST00000578430 SEC14L6B5MCN3 397 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 TEX46H3BTG2 121 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 RPLP1P05386 114 aaKnown RBP10.38□□□□□ -0.75
SRSF1-202ENST00000578430 NMBP08949 121 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 S100A7P31151 101 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 ARL3P36405 182 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
SRSF1-202ENST00000578430 RHOBP62745 196 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 FAM213BQ8TBF2 198 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 DNAJC4Q9NNZ3 241 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 PEF1Q9UBV8 284 aaKnown RBP10.38□□□□□ -0.75
SRSF1-202ENST00000578430 RNF114Q9Y508 228 aa10.38□□□□□ -0.75
SRSF1-202ENST00000578430 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 A0A1W2PPV4 95 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 COX7A2P2O60397 106 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 HYPMO75409 117 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 HBE1P02100 147 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 LGALS1P09382 135 aaKnown RBP10.37□□□□□ -0.75
SRSF1-202ENST00000578430 GATA2P23769 480 aaPredicted RBP10.37□□□□□ -0.75
SRSF1-202ENST00000578430 ADMP35318 185 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 PROK1P58294 105 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 RAB2AP61019 212 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 LCNL1Q6ZST4 164 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 RPP25LQ8N5L8 163 aaKnown RBP10.37□□□□□ -0.75
SRSF1-202ENST00000578430 MBD3L1Q8WWY6 194 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 RCC1LQ96I51 464 aaKnown RBP10.37□□□□□ -0.75
SRSF1-202ENST00000578430 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 MRPL32Q9BYC8 188 aaKnown RBP10.37□□□□□ -0.75
SRSF1-202ENST00000578430 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 RNF24Q9Y225 148 aa10.37□□□□□ -0.75
SRSF1-202ENST00000578430 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 GGCTO75223 188 aaKnown RBP10.36□□□□□ -0.75
SRSF1-202ENST00000578430 IGHV3-11P01762 117 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 H2AFB1P0C5Y9 115 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 OR5G3P0C626 314 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 CDC34P49427 236 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-202ENST00000578430 FOXL1Q12952 345 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 C10orf113Q5VZT2 155 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 RNF125Q96EQ8 232 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
SRSF1-202ENST00000578430 STAB1Q9NY15 2570 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 BMPR1BO00238 502 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 NDUFA4O00483 81 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 IL4P05112 153 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 ORM2P19652 201 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 FHITP49789 147 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 TAS2R45P59539 299 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 LYZP61626 148 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 FAM122CQ6P4D5 195 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 OR1B1Q8NGR6 318 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 LYPD6BQ8NI32 183 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 C4orf3Q8WVX3 66 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 RAB24Q969Q5 203 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 MRPL27Q9P0M9 148 aaKnown RBP10.35□□□□□ -0.75
SRSF1-202ENST00000578430 PFDN2Q9UHV9 154 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 FUT9Q9Y231 359 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 HIGD1AQ9Y241 93 aa10.35□□□□□ -0.75
SRSF1-202ENST00000578430 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
SRSF1-202ENST00000578430 ANKRD34BA5PLL1 514 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 NUDT19A8MXV4 375 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 I3L521 148 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 HSPB1P04792 205 aaKnown RBP10.34□□□□□ -0.75
SRSF1-202ENST00000578430 ZNF726P1Q15940 193 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 GCSAMLQ5JQS6 135 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 FAM78BQ5VT40 261 aa10.34□□□□□ -0.75
SRSF1-202ENST00000578430 TOMM20LQ6UXN7 152 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms