RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ADTRPQ96IZ2 230 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 RIPPLY3P57055 190 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 AARDQ4LEZ3 155 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 C1orf162Q8NEQ5 155 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-204ENST00000578172 RPEQ96AT9 228 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 LOXL4Q96JB6 756 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 USP9YO00507 2555 aaPredicted RBP11.09□□□□□ -0.63
NDEL1-204ENST00000578172 A0A0G2JNJ9 132 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 Q8N7P7 452 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 OR8B3Q8NGG8 313 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 TP73-AS1Q9UF72 201 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 Q9UFV3 132 aa11.09□□□□□ -0.63
NDEL1-204ENST00000578172 C17orf100A8MU93 164 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 SUB1P53999 127 aaKnown RBP eCLIP11.08□□□□□ -0.64
NDEL1-204ENST00000578172 BPIFB3P59826 476 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 LCN2P80188 198 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 K7ERU9 68 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 CRYABP02511 175 aaKnown RBP11.08□□□□□ -0.64
NDEL1-204ENST00000578172 PRCDQ00LT1 54 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 FNDC4Q9H6D8 234 aaPredicted RBP11.08□□□□□ -0.64
NDEL1-204ENST00000578172 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
NDEL1-204ENST00000578172 HTR1DP28221 377 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 CD69Q07108 199 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 CENPEQ02224 2701 aa11.08□□□□□ -0.64
NDEL1-204ENST00000578172 F2RL2O00254 374 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 ADIPOQQ15848 244 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 EXOC3-AS1Q8N2X6 119 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 PRSS3P2Q8NHM4 247 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 HIGD1CA8MV81 97 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 FXYD7P58549 80 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 EIF4EBP1Q13541 118 aaPredicted RBP11.07□□□□□ -0.64
NDEL1-204ENST00000578172 TM4SF20Q53R12 229 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 TMEM14BQ9NUH8 114 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 FBXL7Q9UJT9 491 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 LOC389332A0A1B0GUA5 103 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 DLL1O00548 723 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 GOLT1AQ6ZVE7 132 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 OR52E5Q8NH55 327 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 C1orf159Q96HA4 380 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
NDEL1-204ENST00000578172 RPL27AP46776 148 aaKnown RBP11.06□□□□□ -0.64
NDEL1-204ENST00000578172 RPL15P61313 204 aaKnown RBP11.06□□□□□ -0.64
NDEL1-204ENST00000578172 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 OR4C13Q8NGP0 309 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 IGHV3-49A0A0A0MS15 119 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 COL8A1P27658 744 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
NDEL1-204ENST00000578172 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
NDEL1-204ENST00000578172 RNF114Q9Y508 228 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 TM4SF5O14894 197 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 IGFL4Q6B9Z1 124 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 PNKDQ8N490 385 aa11.06□□□□□ -0.64
NDEL1-204ENST00000578172 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 ZFP30Q9Y2G7 519 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 MBD3L4A6NDZ8 208 aaPredicted RBP11.05□□□□□ -0.64
NDEL1-204ENST00000578172 MBD3L3A6NE82 208 aaPredicted RBP11.05□□□□□ -0.64
NDEL1-204ENST00000578172 MBD3L5A6NJ08 208 aaPredicted RBP11.05□□□□□ -0.64
NDEL1-204ENST00000578172 J3KRW8 73 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 GRNP28799 593 aaKnown RBP11.05□□□□□ -0.64
NDEL1-204ENST00000578172 SLAQ13239 276 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 FBLN7Q53RD9 439 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 RUSC1-AS1Q66K80 236 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 MBD3L2Q8NHZ7 208 aaPredicted RBP11.05□□□□□ -0.64
NDEL1-204ENST00000578172 TMEM191AQ9H0A3 160 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 POLQO75417 2590 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 H0YJW9 148 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 FOXL1Q12952 345 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
NDEL1-204ENST00000578172 CDC42EP3Q9UKI2 254 aa11.05□□□□□ -0.64
NDEL1-204ENST00000578172 IGHV3-66A0A0C4DH42 116 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 A0A1B0GWJ7 208 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 A0A1W2PPI3 338 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 PEX7O00628 323 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 WFDC3Q8IUB2 231 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 CIARTQ8N365 385 aaPredicted RBP11.04□□□□□ -0.64
NDEL1-204ENST00000578172 V9GYV3 84 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 KLRD1Q13241 179 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 KCNS1Q96KK3 526 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
NDEL1-204ENST00000578172 HIVEP3Q5T1R4 2406 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 P01737 135 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 NBEAP1P0C6P0 100 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 SLC25A48Q6ZT89 311 aaKnown RBP11.04□□□□□ -0.64
NDEL1-204ENST00000578172 STPG4Q8N801 248 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 CHRDL1Q9BU40 450 aa11.04□□□□□ -0.64
NDEL1-204ENST00000578172 LEPROTL1O95214 131 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 VWC2Q2TAL6 325 aa11.03□□□□□ -0.64
NDEL1-204ENST00000578172 IGKV3-7A0A075B6H7 116 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms