RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
COPS3-214ENST00000577246 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
COPS3-214ENST00000577246 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.42□□□□□ -0.9
COPS3-214ENST00000577246 COPZ2Q9P299 210 aa9.42□□□□□ -0.9
COPS3-214ENST00000577246 KLK11Q9UBX7 282 aa9.42□□□□□ -0.9
COPS3-214ENST00000577246 CACFD1Q9UGQ2 172 aa9.42□□□□□ -0.9
COPS3-214ENST00000577246 PAX9P55771 341 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 AARDQ4LEZ3 155 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 SPATA12Q7Z6I5 190 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 OR51G1Q8NGK1 321 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 NPIPB3Q92617 1050 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 RNF125Q96EQ8 232 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 SLC35B3Q9H1N7 401 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 Q9H521 79 aa9.41□□□□□ -0.9
COPS3-214ENST00000577246 M0QYG6 137 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 ISLRO14498 428 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 PSG1P11464 419 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 PI3P19957 117 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 UCP1P25874 307 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 B2MP61769 119 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 FAM78BQ5VT40 261 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 C1orf158Q8N1D5 194 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 ARRDC1Q8N5I2 433 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 PBDC1Q9BVG4 233 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 RPRMQ9NS64 109 aa9.4□□□□□ -0.9
COPS3-214ENST00000577246 CEBPZOSA8MTT3 80 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 ANKRD65E5RJM6 399 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 NUDT3O95989 172 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 FABP1P07148 127 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 MEOX2P50222 304 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 SUPT4H1P63272 117 aaKnown RBP9.39□□□□□ -0.91
COPS3-214ENST00000577246 CLINT1Q14677 625 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
COPS3-214ENST00000577246 SNX29P2Q8IUI4 249 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 ABHD1Q96SE0 405 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 WDR12Q9GZL7 423 aaKnown RBP9.39□□□□□ -0.91
COPS3-214ENST00000577246 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
COPS3-214ENST00000577246 A0A0G2JRQ6 117 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 A0A0J9YX75 114 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 F5H768 121 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 APOA1P02647 267 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 TBPP20226 339 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 DEFB1P60022 68 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 SP6Q3SY56 376 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 LHFPL1Q86WI0 220 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 DOK5Q9P104 306 aa9.38□□□□□ -0.91
COPS3-214ENST00000577246 NACAE9PAV3 2078 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 SOCS3O14543 225 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 INSP01308 110 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 ATP5G1P05496 136 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 DEFB130BP0DP73 79 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 DEFB130AP0DP74 79 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 TSPOP30536 169 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 RPS19P39019 145 aaKnown RBP9.37□□□□□ -0.91
COPS3-214ENST00000577246 ATP5G3P48201 142 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 KLF9Q13886 244 aaPredicted RBP9.37□□□□□ -0.91
COPS3-214ENST00000577246 NEDD8Q15843 81 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 RBPMSQ93062 196 aaKnown RBP9.37□□□□□ -0.91
COPS3-214ENST00000577246 PPP1R14BQ96C90 147 aa9.37□□□□□ -0.91
COPS3-214ENST00000577246 ZFP92A6NM28 416 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 TNFAIP8O95379 198 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 CDS2O95674 445 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
COPS3-214ENST00000577246 OR8I2Q8N0Y5 310 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 GPR146Q96CH1 333 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 C16orf92Q96LL3 132 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 TMEM222Q9H0R3 208 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 CACNG5Q9UF02 275 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 U3KQ87 197 aa9.36□□□□□ -0.91
COPS3-214ENST00000577246 CBY3A6NI87 242 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 F6UB75 175 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 GABARAPH6UMI1 98 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
COPS3-214ENST00000577246 NXPH3O95157 252 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 GABARAPO95166 117 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 GALR1P47211 349 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 NMSQ5H8A3 153 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 SSX7Q7RTT5 188 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 TERB2Q8NHR7 220 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 Q9H8V8 135 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 PTTG2Q9NZH5 202 aa9.35□□□□□ -0.91
COPS3-214ENST00000577246 C14orf166Q9Y224 244 aaKnown RBP9.35□□□□□ -0.91
COPS3-214ENST00000577246 HERC1Q15751 4861 aa9.34□□□□□ -0.91
COPS3-214ENST00000577246 TEX13DA0A0J9YY54 714 aaPredicted RBP9.34□□□□□ -0.91
COPS3-214ENST00000577246 A0A1W2PPQ1 181 aa9.34□□□□□ -0.91
COPS3-214ENST00000577246 A8MTW9 85 aa9.34□□□□□ -0.91
COPS3-214ENST00000577246 SNRPGP15A8MWD9 76 aa9.34□□□□□ -0.91
COPS3-214ENST00000577246 CD3DP04234 171 aa9.34□□□□□ -0.91
COPS3-214ENST00000577246 OR5AC1P0C628 307 aa9.34□□□□□ -0.91
COPS3-214ENST00000577246 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
COPS3-214ENST00000577246 LYZP61626 148 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms