RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 SLC25A5P05141 298 aaKnown RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 NBEAP1P0C6P0 100 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 GP9P14770 177 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 RBPJQ06330 500 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 SLAQ13239 276 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 LHFPL4Q7Z7J7 247 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 SPACA3Q8IXA5 215 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 VN1R17PQ8TDU5 208 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 BLNKQ8WV28 456 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 VKORC1Q9BQB6 163 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 FAM103A1Q9BTL3 118 aaKnown RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 CLEC7AQ9BXN2 247 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 NRN1Q9NPD7 142 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF586Q9NXT0 402 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 IGHV3-21A0A0B4J1V1 117 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 LYNX1G3V0Z9 82 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 RBP4P02753 201 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 LYNX1P0DP58 116 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 HIST1H1EP10412 219 aaKnown RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 UBE2G1P62253 170 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 PRB3Q04118 309 aaPredicted RBP7.14□□□□□ -1.27
NCBP3-204ENST00000574911 PPP1R27Q86WC6 154 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 C8orf46Q8TAG6 207 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 TMEM68Q96MH6 324 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
NCBP3-204ENST00000574911 AKAP13Q12802 2813 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 LY6LH3BQJ8 138 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF324O75467 553 aaPredicted RBP7.13□□□□□ -1.27
NCBP3-204ENST00000574911 FAM87AP0C7U9 286 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 APELAP0DMC3 54 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 AMTP48728 403 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
NCBP3-204ENST00000574911 PRR27Q6MZM9 219 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
NCBP3-204ENST00000574911 GPR82Q96P67 336 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 MIEN1Q9BRT3 115 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 ATG101Q9BSB4 218 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 VAMP8Q9BV40 100 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 MRPL27Q9P0M9 148 aaKnown RBP7.13□□□□□ -1.27
NCBP3-204ENST00000574911 ICE1Q9Y2F5 2266 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 TOMM40O96008 361 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 PMCHP20382 165 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 KRTDAPP60985 99 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 NIT1Q86X76 327 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 C18orf32Q8TCD1 76 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 FMC1Q96HJ9 113 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 NEU1Q99519 415 aa7.13□□□□□ -1.27
NCBP3-204ENST00000574911 PPIAL4CA0A0B4J2A2 164 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 VWC2LB2RUY7 222 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 I3L2K1 104 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 K7ENP7 123 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 OR2J3O76001 311 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 LTAP01374 205 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 IGLC1P0CG04 106 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 PPIAL4GP0DN37 164 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 CA7P43166 264 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 ATP5L2Q7Z4Y8 100 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 C5orf17Q8NAS9 161 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 RNF5Q99942 180 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 PRSS22Q9GZN4 317 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 Q9H3A6 140 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 FBXL15Q9H469 300 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 GSX1Q9H4S2 264 aaPredicted RBP7.12□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF492Q9P255 531 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 PAM16Q9Y3D7 125 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF292O60281 2723 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 CUL9Q8IWT3 2517 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 DIRC3C9JPN6 131 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 COX7A1P24310 79 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
NCBP3-204ENST00000574911 ZNF705AQ6ZN79 300 aaPredicted RBP7.12□□□□□ -1.27
NCBP3-204ENST00000574911 LINC01560Q8TB33 94 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 SRSF12Q8WXF0 261 aaKnown RBP7.12□□□□□ -1.27
NCBP3-204ENST00000574911 SGK494Q96LW2 274 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 TMEM14CQ9P0S9 112 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 HIGD1AQ9Y241 93 aa7.12□□□□□ -1.27
NCBP3-204ENST00000574911 C19orf71A6NCJ1 209 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 TCRAP04437 139 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 PSG1P11464 419 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 CT83Q5H943 113 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 LEMD1Q68G75 181 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 MUC15Q8N387 334 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 LY6G5BQ8NDX9 201 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 RPEQ96AT9 228 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 SRSF8Q9BRL6 282 aaKnown RBP7.11□□□□□ -1.27
NCBP3-204ENST00000574911 ALKBH7Q9BT30 221 aaPredicted RBP7.11□□□□□ -1.27
NCBP3-204ENST00000574911 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
NCBP3-204ENST00000574911 RPH3ALQ9UNE2 315 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 M0QZK8 103 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 TCAPO15273 167 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 SIAH2O43255 324 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 CTRLP40313 264 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 MMDQ15546 238 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 OR4B1Q8NGF8 309 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 MGAQ8IWI9 3026 aa7.11□□□□□ -1.27
NCBP3-204ENST00000574911 H3BTX0 84 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms