RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PRSS46E5RG02 174 aa14.42□□□□□ -0.1
SCARF1-208ENST00000574545 SYNGR2O43760 224 aa14.42□□□□□ -0.1
SCARF1-208ENST00000574545 ZNF90Q03938 601 aa14.42□□□□□ -0.1
SCARF1-208ENST00000574545 OR51G1Q8NGK1 321 aa14.42□□□□□ -0.1
SCARF1-208ENST00000574545 NDUFA13Q9P0J0 144 aa14.42□□□□□ -0.1
SCARF1-208ENST00000574545 EPPK1P58107 5090 aaKnown RBP14.42□□□□□ -0.1
SCARF1-208ENST00000574545 IGKV1OR2-108A0A075B7D4 117 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 MED6O75586 246 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 IL7P13232 177 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 INPP1P49441 399 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 AP2S1P53680 142 aaPredicted RBP14.41□□□□□ -0.1
SCARF1-208ENST00000574545 RAB11AP62491 216 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 ID3Q02535 119 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 GATAD1Q8WUU5 269 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 RNF125Q96EQ8 232 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 CIB3Q96Q77 187 aaPredicted RBP14.41□□□□□ -0.1
SCARF1-208ENST00000574545 C7orf50Q9BRJ6 194 aaKnown RBP14.41□□□□□ -0.1
SCARF1-208ENST00000574545 MAGT1Q9H0U3 335 aa14.41□□□□□ -0.1
SCARF1-208ENST00000574545 ADAP1O75689 374 aa14.4□□□□□ -0.1
SCARF1-208ENST00000574545 GIG44P09565 113 aaPredicted RBP14.4□□□□□ -0.1
SCARF1-208ENST00000574545 OR4E1P0C645 316 aa14.4□□□□□ -0.1
SCARF1-208ENST00000574545 ZNF688P0C7X2 276 aa14.4□□□□□ -0.1
SCARF1-208ENST00000574545 DHRS2Q13268 280 aa14.4□□□□□ -0.1
SCARF1-208ENST00000574545 TRPT1Q86TN4 253 aaKnown RBP14.4□□□□□ -0.1
SCARF1-208ENST00000574545 THAP8Q8NA92 274 aa14.4□□□□□ -0.1
SCARF1-208ENST00000574545 SLC35E1Q96K37 410 aa14.4□□□□□ -0.1
SCARF1-208ENST00000574545 KMT2AQ03164 3969 aa14.39□□□□□ -0.11
SCARF1-208ENST00000574545 LINC00854A0A1B0GVQ3 168 aa14.39□□□□□ -0.11
SCARF1-208ENST00000574545 ZFP92A6NM28 416 aa14.39□□□□□ -0.11
SCARF1-208ENST00000574545 PLA2G10O15496 165 aa14.39□□□□□ -0.11
SCARF1-208ENST00000574545 EIF2B2P49770 351 aaKnown RBP14.39□□□□□ -0.11
SCARF1-208ENST00000574545 TRGV9Q99603 122 aa14.39□□□□□ -0.11
SCARF1-208ENST00000574545 SEPSECSQ9HD40 501 aaKnown RBP14.39□□□□□ -0.11
SCARF1-208ENST00000574545 WRBO00258 174 aa14.38□□□□□ -0.11
SCARF1-208ENST00000574545 OR8G2PQ6IF36 304 aa14.38□□□□□ -0.11
SCARF1-208ENST00000574545 STHQ8IWL8 128 aa14.38□□□□□ -0.11
SCARF1-208ENST00000574545 OR4D5Q8NGN0 318 aa14.38□□□□□ -0.11
SCARF1-208ENST00000574545 RARRES2Q99969 163 aa14.38□□□□□ -0.11
SCARF1-208ENST00000574545 VPS13DQ5THJ4 4388 aa14.37□□□□□ -0.11
SCARF1-208ENST00000574545 CENPXA8MT69 81 aa14.37□□□□□ -0.11
SCARF1-208ENST00000574545 CA1P00915 261 aaPredicted RBP14.37□□□□□ -0.11
SCARF1-208ENST00000574545 ANXA7P20073 488 aaKnown RBP14.37□□□□□ -0.11
SCARF1-208ENST00000574545 SIGLEC15Q6ZMC9 328 aa14.37□□□□□ -0.11
SCARF1-208ENST00000574545 NRN1Q9NPD7 142 aa14.37□□□□□ -0.11
SCARF1-208ENST00000574545 KNCNA6PVL3 124 aa14.36□□□□□ -0.11
SCARF1-208ENST00000574545 RPP30P78346 268 aaKnown RBP14.36□□□□□ -0.11
SCARF1-208ENST00000574545 OR11H2Q8NH07 326 aa14.36□□□□□ -0.11
SCARF1-208ENST00000574545 COQ8AQ8NI60 647 aa14.36□□□□□ -0.11
SCARF1-208ENST00000574545 RAB40CQ96S21 281 aa14.36□□□□□ -0.11
SCARF1-208ENST00000574545 PMS2P5A8MQ11 134 aa14.35□□□□□ -0.11
SCARF1-208ENST00000574545 SNRPGP15A8MWD9 76 aa14.35□□□□□ -0.11
SCARF1-208ENST00000574545 POLR2GP62487 172 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCARF1-208ENST00000574545 CNPY1Q3B7I2 92 aa14.35□□□□□ -0.11
SCARF1-208ENST00000574545 SPANXN5Q5MJ07 72 aa14.35□□□□□ -0.11
SCARF1-208ENST00000574545 PBDC1Q9BVG4 233 aa14.35□□□□□ -0.11
SCARF1-208ENST00000574545 PAIP2BQ9ULR5 123 aaKnown RBP14.35□□□□□ -0.11
SCARF1-208ENST00000574545 JTBO76095 146 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 NUP62P37198 522 aaPredicted RBP14.34□□□□□ -0.11
SCARF1-208ENST00000574545 PAX9P55771 341 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 OR2F1Q13607 317 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 PMS2P11Q13670 270 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 PSMG4Q5JS54 123 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 MORN3Q6PF18 240 aaPredicted RBP14.34□□□□□ -0.11
SCARF1-208ENST00000574545 TMEM217Q8N7C4 229 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 MITD1Q8WV92 249 aa14.34□□□□□ -0.11
SCARF1-208ENST00000574545 C11orf68Q9H3H3 251 aaKnown RBP14.34□□□□□ -0.11
SCARF1-208ENST00000574545 STRAPQ9Y3F4 350 aaKnown RBP14.34□□□□□ -0.11
SCARF1-208ENST00000574545 CXorf65A6NEN9 183 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 H3BP45 60 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 FABP1P07148 127 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 SPP1P10451 314 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 C4BPBP20851 252 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 NKX2-1P43699 371 aaPredicted RBP14.33□□□□□ -0.12
SCARF1-208ENST00000574545 LYZP61626 148 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 C4orf46Q504U0 113 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 ACTL10Q5JWF8 245 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 C1orf194Q5T5A4 169 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 CEMP1Q6PRD7 247 aaPredicted RBP14.33□□□□□ -0.12
SCARF1-208ENST00000574545 TMEM182Q6ZP80 229 aaPredicted RBP14.33□□□□□ -0.12
SCARF1-208ENST00000574545 CSNK1G2-AS1Q8NCQ2 148 aa14.33□□□□□ -0.12
SCARF1-208ENST00000574545 LYRM1O43325 122 aa14.32□□□□□ -0.12
SCARF1-208ENST00000574545 CFDP00746 253 aaPredicted RBP14.32□□□□□ -0.12
SCARF1-208ENST00000574545 IFNA21P01568 189 aa14.32□□□□□ -0.12
SCARF1-208ENST00000574545 TMEM41BQ5BJD5 291 aa14.32□□□□□ -0.12
SCARF1-208ENST00000574545 SMIM8Q96KF7 97 aa14.32□□□□□ -0.12
SCARF1-208ENST00000574545 WDR12Q9GZL7 423 aaKnown RBP14.32□□□□□ -0.12
SCARF1-208ENST00000574545 PFDN2Q9UHV9 154 aa14.32□□□□□ -0.12
SCARF1-208ENST00000574545 NUPR2A6NF83 97 aa14.31□□□□□ -0.12
SCARF1-208ENST00000574545 ZNF705EA8MWA4 302 aaPredicted RBP14.31□□□□□ -0.12
SCARF1-208ENST00000574545 SOCS3O14543 225 aa14.31□□□□□ -0.12
SCARF1-208ENST00000574545 SNRPD3P62318 126 aaKnown RBP14.31□□□□□ -0.12
SCARF1-208ENST00000574545 ACOT7LQ6ZUV0 252 aa14.31□□□□□ -0.12
SCARF1-208ENST00000574545 C20orf85Q9H1P6 137 aa14.31□□□□□ -0.12
SCARF1-208ENST00000574545 PSENENQ9NZ42 101 aa14.31□□□□□ -0.12
SCARF1-208ENST00000574545 H3BMM0 161 aa14.3□□□□□ -0.12
SCARF1-208ENST00000574545 TCRBP04435 133 aa14.3□□□□□ -0.12
SCARF1-208ENST00000574545 GATA2P23769 480 aaPredicted RBP14.3□□□□□ -0.12
SCARF1-208ENST00000574545 TMEM14EPQ6UXP3 125 aa14.3□□□□□ -0.12
SCARF1-208ENST00000574545 LINC00299Q6ZSB3 139 aa14.3□□□□□ -0.12
SCARF1-208ENST00000574545 TMEM144Q7Z5S9 345 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms