RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 FNDC10F2Z333 226 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 H7BYZ3 331 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 M0QZK8 103 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 SDCBPO00560 298 aaPredicted RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 OVOL1O14753 267 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 DEGS1O15121 323 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 IGLV3-19P01714 112 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CLPSP04118 112 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 HTR1AP08908 422 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CXCL1P09341 107 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 METTL15P1P0C7V9 234 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TRGC1P0CF51 173 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CRYGAP11844 174 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CSRP1P21291 193 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 FKBP2P26885 142 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 TMBIM6P55061 237 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 RPS28P62857 69 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 DYNLT1P63172 113 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 MYL5Q02045 173 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 EIF3IQ13347 325 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 MSMO1Q15800 293 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 LCN15Q6UWW0 184 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 SOSTDC1Q6X4U4 206 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 AAED1Q7RTV5 226 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 DEFB128Q7Z7B8 93 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 PDZD9Q8IXQ8 264 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 SLC30A7Q8NEW0 376 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 OR4X2Q8NGF9 303 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 AQP3Q92482 292 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TCEAL4Q96EI5 215 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CARD19Q96LW7 228 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 Q9BRP9 147 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 PRADC1Q9BSG0 188 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 NPCDR1Q9BY65 106 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 OR2H1Q9GZK4 316 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TMEM126AQ9H061 195 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CACYBPQ9HB71 228 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 POPDC3Q9HBV1 291 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 OTORQ9NRC9 128 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 NHP2Q9NX24 153 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 CCL26Q9Y258 94 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TRPM1Q7Z4N2 1603 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 CPAMD8Q8IZJ3 1885 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 NUP210Q8TEM1 1887 aaPredicted RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 OVOS2A0A0G2JMS6 1433 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TRAPPC8Q9Y2L5 1435 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 TRPM6Q9BX84 2022 aa1.13□□□□□ -2.23
CHD3-217ENST00000574022 PRRC2AP48634 2157 aaKnown RBP1.13□□□□□ -2.23
CHD3-217ENST00000574022 NUP98P52948 1817 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 ARHGEF28Q8N1W1 1705 aaKnown RBP1.12□□□□□ -2.23
CHD3-217ENST00000574022 SCN9AQ15858 1988 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 DOCK4Q8N1I0 1966 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 PLXNB1O43157 2135 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 TRAV5A0A0B4J249 113 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 TMEM189A5PLL7 270 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 K7ERJ3 54 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 HIST1H2BKO60814 126 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 NAPSAO96009 420 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 PMP2P02689 132 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 SHBGP04278 402 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 HIST1H2BJP06899 126 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 DBIP07108 87 aaKnown RBP1.12□□□□□ -2.23
CHD3-217ENST00000574022 RNASE2P10153 161 aaKnown RBP1.12□□□□□ -2.23
CHD3-217ENST00000574022 GPX2P18283 190 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 SDC2P34741 201 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 FUSP35637 526 aaKnown RBP eCLIP1.12□□□□□ -2.23
CHD3-217ENST00000574022 SRP9P49458 86 aaKnown RBP1.12□□□□□ -2.23
CHD3-217ENST00000574022 AQP4P55087 323 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 ARPP19P56211 112 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 NDUFA6P56556 154 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 CKS1BP61024 79 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 PSPHP78330 225 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 SMIM21Q3B7S5 101 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 CCDC58Q4VC31 144 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 EIF5AL1Q6IS14 154 aaKnown RBP1.12□□□□□ -2.23
CHD3-217ENST00000574022 OR8I2Q8N0Y5 310 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 TMEM229BQ8NBD8 167 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 ZNF714Q96N38 554 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 C20orf166-AS1Q96NR2 134 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 TSC22D3Q99576 134 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 TCEAL2Q9H3H9 227 aaPredicted RBP1.12□□□□□ -2.23
CHD3-217ENST00000574022 NAT8BQ9UHF3 227 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 BAIAP2Q9UQB8 552 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 RNF11Q9Y3C5 154 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 SEC16AO15027 2179 aa1.12□□□□□ -2.23
CHD3-217ENST00000574022 ADAMTS7Q9UKP4 1686 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 IGKV1D-42A0A075B6H8 117 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 IGKV1D-17A0A075B6S4 117 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 J3QQQ9 107 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 TIMM17BO60830 172 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 PGLYRP1O75594 196 aaPredicted RBP1.11□□□□□ -2.23
CHD3-217ENST00000574022 LYZL6O75951 148 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 IGKV1-17P01599 117 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 PRB2P02812 416 aaPredicted RBP1.11□□□□□ -2.23
CHD3-217ENST00000574022 IFNA4P05014 189 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 FABP2P12104 132 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 HLA-EP13747 358 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 CMPK1P30085 196 aa1.11□□□□□ -2.23
CHD3-217ENST00000574022 PEBP1P30086 187 aaKnown RBP1.11□□□□□ -2.23
CHD3-217ENST00000574022 AKR1C3P42330 323 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms