RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SMAD5-AS1Q9Y6J3 95 aa9.64□□□□□ -0.87
TRAPPC1-206ENST00000573989 IZUMO1RA6ND01 250 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 CHEK1O14757 476 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 HNRNPCP07910 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 CRYBB3P26998 211 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 S100A11P31949 105 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 EIF2B2P49770 351 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 SULT1A1P50225 295 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 H2BFSP57053 126 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 RRAS2P62070 204 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 PAFAH1B2P68402 229 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 TMEM61Q8N0U2 210 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 LILRB2Q8N423 598 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 BPIFCQ8NFQ6 507 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 WDR89Q96FK6 387 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 SPAG8Q99932 426 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 RABAC1Q9UI14 185 aa9.63□□□□□ -0.87
TRAPPC1-206ENST00000573989 DNAH3Q8TD57 4116 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGKV1D-37A0A075B6S9 117 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 FAM24AA6NFZ4 105 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 TSPAN4O14817 238 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 P2RY1P47900 373 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 SELENOTP62341 195 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 ZNF90Q03938 601 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 SLC38A11Q08AI6 406 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 TEPPQ6URK8 271 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 S100A7AQ86SG5 101 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 ASB13Q8WXK3 278 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 RNF125Q96EQ8 232 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 RNF2Q99496 336 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 PBDC1Q9BVG4 233 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 C11orf1Q9H5F2 150 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGHV3OR16-13A0A075B7E8 117 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGHV3-74A0A0B4J1X5 117 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 CCNKO75909 580 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 CST7O76096 145 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 MPC2O95563 127 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 AP2S1P53680 142 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 CD81P60033 236 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 LYZP61626 148 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 RAB31Q13636 194 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 ATP6V1FQ16864 119 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 TMEM252Q8N6L7 170 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 TMEM217Q8N7C4 229 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 ST8SIA2Q92186 375 aa9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 LSM4Q9Y4Z0 139 aaKnown RBP9.61□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGKV1OR2-108A0A075B7D4 117 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 HELTA6NFD8 242 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 CMC4P56277 68 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 BAXQ07812 192 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 FGL1Q08830 312 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 OR2F1Q13607 317 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 USF2Q15853 346 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 CYP2G1PQ6ZSU1 146 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 TCF24Q7RTU0 167 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 THAP6Q8TBB0 222 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 PPP1R14BQ96C90 147 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 NEURL2Q9BR09 285 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 UQCC1Q9NVA1 299 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGHV3-66A0A0C4DH42 116 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGSF23A1L1A6 192 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 DNASE2O00115 360 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 DFFBO76075 338 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 APOHP02749 345 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 CXCL3P19876 107 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 ARL16Q0P5N6 197 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 FCN2Q15485 313 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 TMEM147Q9BVK8 224 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 TUBA4BQ9H853 241 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 FBXL17Q9UF56 701 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 SLC45A2Q9UMX9 530 aa9.59□□□□□ -0.87
TRAPPC1-206ENST00000573989 IGKV3-7A0A075B6H7 116 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 RAP2BP61225 183 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 PXDC1Q5TGL8 231 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 ZNF546Q86UE3 836 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 Q8N1Y9 231 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 OR11H7Q8NGC8 314 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 RNF24Q9Y225 148 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 U3KQE9 123 aa9.58□□□□□ -0.88
TRAPPC1-206ENST00000573989 TRAV2A0A0B4J234 112 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 A8MZ25 164 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 OR11H12B2RN74 326 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 H0YIZ8 118 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 AGPAT2O15120 278 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 BUB3O43684 328 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 MPDU1O75352 247 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 CD7P09564 240 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 GIPP09681 153 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 LINC00869P0C866 280 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 ORM2P19652 201 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 CAMLGP49069 296 aa9.57□□□□□ -0.88
TRAPPC1-206ENST00000573989 EWSR1Q01844 656 aaKnown RBP eCLIP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms