RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PSG1P11464 419 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 NUP62P37198 522 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 NANOS2P60321 138 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 LYZP61626 148 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 RAB11AP62491 216 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 TMEM41BQ5BJD5 291 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 SPANXN2Q5MJ10 180 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 MORN3Q6PF18 240 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 SIGLEC15Q6ZMC9 328 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 TRPT1Q86TN4 253 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 CENPSQ8N2Z9 138 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 DCANP1Q8TF63 244 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 GLMPQ8WWB7 406 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 PPP1R14BQ96C90 147 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 PFDN2Q9UHV9 154 aa7.06□□□□□ -1.28
NPLOC4-212ENST00000573328 MED6O75586 246 aa7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 ATP5IP56385 69 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 ZNF79Q15937 498 aa7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 TRIQKQ629K1 86 aa7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 SLC25A21Q9BQT8 299 aaPredicted RBP7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 NRN1Q9NPD7 142 aa7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 CLEC5AQ9NY25 188 aa7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 U3KQE9 123 aa7.05□□□□□ -1.28
NPLOC4-212ENST00000573328 FAM90A26D6RGX4 464 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 BUB3O43684 328 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 SFT2D2O95562 160 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 HOXB5P09067 269 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 C4BPBP20851 252 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 GPX4P36969 197 aaPredicted RBP7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 NUTF2P61970 127 aaKnown RBP7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 RPP30P78346 268 aaKnown RBP7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 ZNF90Q03938 601 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 PPP1R1AQ13522 171 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 OR2F1Q13607 317 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 GAMTQ14353 236 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 DEDD2Q8WXF8 326 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 CIB3Q96Q77 187 aaPredicted RBP7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 MAGT1Q9H0U3 335 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 TMED3Q9Y3Q3 217 aa7.04□□□□□ -1.28
NPLOC4-212ENST00000573328 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 WRBO00258 174 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 SLC25A6P12236 298 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 MIFP14174 115 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 OR8G2PQ6IF36 304 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 CCDC190Q86UF4 302 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 LRTM2Q8N967 370 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 Q8NAQ8 132 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 COQ8AQ8NI60 647 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 RAB40CQ96S21 281 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 C1QTNF4Q9BXJ3 329 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 TBC1D24Q9ULP9 559 aa7.03□□□□□ -1.28
NPLOC4-212ENST00000573328 IGKV1D-37A0A075B6S9 117 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 LINC00854A0A1B0GVQ3 168 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 SMCO3A2RU48 225 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 SNRPGP15A8MWD9 76 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 H3BP45 60 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 SYNGR2O43760 224 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 PITX3O75364 302 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 ID1P41134 155 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 AKR1C1Q04828 323 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 SPANXN5Q5MJ07 72 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 GGNBP1Q5YKI7 109 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 C2CD4CQ8TF44 421 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 LINC00052Q96N35 136 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 TRGV9Q99603 122 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 SRRQ9GZT4 340 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 RBM38Q9H0Z9 239 aaKnown RBP7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
NPLOC4-212ENST00000573328 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 CENPXA8MT69 81 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 IGKV3-20P01619 116 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 GIG44P09565 113 aaPredicted RBP7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 HLA-DRB4P13762 266 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 UBE2MP61081 183 aaKnown RBP7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 OR8I2Q8N0Y5 310 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 BPIFCQ8NFQ6 507 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 SLC25A22Q9H936 323 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 SEPSECSQ9HD40 501 aaKnown RBP7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 STRAPQ9Y3F4 350 aaKnown RBP7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 HLA-DRB4X5D2U9 266 aa7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 EPPK1P58107 5090 aaKnown RBP7.01□□□□□ -1.29
NPLOC4-212ENST00000573328 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 C9orf170A2RU37 121 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 ZNF705EA8MWA4 302 aaPredicted RBP7□□□□□ -1.29
NPLOC4-212ENST00000573328 IGLL5B9A064 214 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 C11orf94C9JXX5 98 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 H3BMM0 161 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 ZNF701M0R085 212 aaPredicted RBP7□□□□□ -1.29
NPLOC4-212ENST00000573328 DEDDO75618 318 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 ADAP1O75689 374 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 SCGB1D2O95969 90 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 IFNA21P01568 189 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 RBMY1A1P0DJD3 496 aaKnown RBP7□□□□□ -1.29
NPLOC4-212ENST00000573328 RBMY1CP0DJD4 496 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 HLA-DMBP28068 263 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 NKX2-1P43699 371 aaPredicted RBP7□□□□□ -1.29
NPLOC4-212ENST00000573328 PSMB3P49720 205 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 FXYD7P58549 80 aa7□□□□□ -1.29
NPLOC4-212ENST00000573328 RBMY1FQ15415 496 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms