RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 OR4E1P0C645 316 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 PSG1P11464 419 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 ATF4P18848 351 aaPredicted RBP12.69□□□□□ -0.38
SMG6-212ENST00000573153 RAB11AP62491 216 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 LYG2Q86SG7 212 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 FLVCR2Q9UPI3 526 aa12.69□□□□□ -0.38
SMG6-212ENST00000573153 PLA2G10O15496 165 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 GIG44P09565 113 aaPredicted RBP12.68□□□□□ -0.38
SMG6-212ENST00000573153 IAPPP10997 89 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 EIF2B2P49770 351 aaKnown RBP12.68□□□□□ -0.38
SMG6-212ENST00000573153 AP2S1P53680 142 aaPredicted RBP12.68□□□□□ -0.38
SMG6-212ENST00000573153 RPL11P62913 178 aaKnown RBP12.68□□□□□ -0.38
SMG6-212ENST00000573153 RPP30P78346 268 aaKnown RBP12.68□□□□□ -0.38
SMG6-212ENST00000573153 ID3Q02535 119 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 OR8G2PQ6IF36 304 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 OR51G1Q8NGK1 321 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 COQ8AQ8NI60 647 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 CSTL1Q9H114 145 aa12.68□□□□□ -0.38
SMG6-212ENST00000573153 SEPSECSQ9HD40 501 aaKnown RBP12.68□□□□□ -0.38
SMG6-212ENST00000573153 BUB3O43684 328 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
SMG6-212ENST00000573153 DEFB131AP59861 70 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 OR4D5Q8NGN0 318 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 RNF125Q96EQ8 232 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 TRGV9Q99603 122 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 RABAC1Q9UI14 185 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
SMG6-212ENST00000573153 AGRNO00468 2067 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 VPS13DQ5THJ4 4388 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 MPTX1A8MV57 137 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 ADAP1O75689 374 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 FABP1P07148 127 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 ANXA7P20073 488 aaKnown RBP12.66□□□□□ -0.38
SMG6-212ENST00000573153 LEMD1Q68G75 181 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 STXBP6Q8NFX7 210 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 CCDC32Q9BV29 185 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 MAGT1Q9H0U3 335 aa12.66□□□□□ -0.38
SMG6-212ENST00000573153 IGKV1OR2-108A0A075B7D4 117 aa12.65□□□□□ -0.38
SMG6-212ENST00000573153 LINC00854A0A1B0GVQ3 168 aa12.65□□□□□ -0.38
SMG6-212ENST00000573153 ZFP92A6NM28 416 aa12.65□□□□□ -0.38
SMG6-212ENST00000573153 LYRM1O43325 122 aa12.65□□□□□ -0.38
SMG6-212ENST00000573153 ZNF90Q03938 601 aa12.65□□□□□ -0.38
SMG6-212ENST00000573153 MITD1Q8WV92 249 aa12.65□□□□□ -0.38
SMG6-212ENST00000573153 WRBO00258 174 aa12.64□□□□□ -0.39
SMG6-212ENST00000573153 IFNA21P01568 189 aa12.64□□□□□ -0.39
SMG6-212ENST00000573153 C4orf46Q504U0 113 aa12.64□□□□□ -0.39
SMG6-212ENST00000573153 TRPT1Q86TN4 253 aaKnown RBP12.64□□□□□ -0.39
SMG6-212ENST00000573153 C20orf85Q9H1P6 137 aa12.64□□□□□ -0.39
SMG6-212ENST00000573153 NRN1Q9NPD7 142 aa12.64□□□□□ -0.39
SMG6-212ENST00000573153 PFDN2Q9UHV9 154 aa12.64□□□□□ -0.39
SMG6-212ENST00000573153 DNAH6Q9C0G6 4158 aa12.63□□□□□ -0.39
SMG6-212ENST00000573153 CFDP00746 253 aaPredicted RBP12.63□□□□□ -0.39
SMG6-212ENST00000573153 NKX2-1P43699 371 aaPredicted RBP12.63□□□□□ -0.39
SMG6-212ENST00000573153 C1orf194Q5T5A4 169 aa12.63□□□□□ -0.39
SMG6-212ENST00000573153 SIGLEC15Q6ZMC9 328 aa12.63□□□□□ -0.39
SMG6-212ENST00000573153 STRAPQ9Y3F4 350 aaKnown RBP12.63□□□□□ -0.39
SMG6-212ENST00000573153 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 C4BPBP20851 252 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 POLR2GP62487 172 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMG6-212ENST00000573153 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 SLC45A2Q9UMX9 530 aa12.62□□□□□ -0.39
SMG6-212ENST00000573153 TCRBP04435 133 aa12.61□□□□□ -0.39
SMG6-212ENST00000573153 STHQ8IWL8 128 aa12.61□□□□□ -0.39
SMG6-212ENST00000573153 FBXL17Q9UF56 701 aa12.61□□□□□ -0.39
SMG6-212ENST00000573153 PAIP2BQ9ULR5 123 aaKnown RBP12.61□□□□□ -0.39
SMG6-212ENST00000573153 DNAH10Q8IVF4 4471 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 A6NHS1 94 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 KNCNA6PVL3 124 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 PMS2P5A8MQ11 134 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 CA1P00915 261 aaPredicted RBP12.6□□□□□ -0.39
SMG6-212ENST00000573153 SPP1P10451 314 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 PAX9P55771 341 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 TAS2R30P59541 319 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 SNRPD3P62318 126 aaKnown RBP12.6□□□□□ -0.39
SMG6-212ENST00000573153 PMS2P11Q13670 270 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 IAH1Q2TAA2 248 aaPredicted RBP12.6□□□□□ -0.39
SMG6-212ENST00000573153 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
SMG6-212ENST00000573153 TMEM14EPQ6UXP3 125 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 TMEM144Q7Z5S9 345 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 TMEM217Q8N7C4 229 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 ZBTB8BQ8NAP8 495 aaPredicted RBP12.6□□□□□ -0.39
SMG6-212ENST00000573153 S100ZQ8WXG8 99 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 LINC00476Q8WZB0 136 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
SMG6-212ENST00000573153 PSENENQ9NZ42 101 aa12.6□□□□□ -0.39
SMG6-212ENST00000573153 FNDC10F2Z333 226 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 H3BP45 60 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 LYZP61626 148 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 ACOT7LQ6ZUV0 252 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 Q8NAQ8 132 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 C17orf77Q96MU5 243 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 RAB40CQ96S21 281 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms