RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 OVOL2Q9BRP0 275 aa14.9□□□□□ -0.02
NUP88-204ENST00000572290 IGKV1D-37A0A075B6S9 117 aa14.89□□□□□ -0.03
NUP88-204ENST00000572290 FABP1P07148 127 aa14.89□□□□□ -0.03
NUP88-204ENST00000572290 EIF2B2P49770 351 aaKnown RBP14.89□□□□□ -0.03
NUP88-204ENST00000572290 POLR2GP62487 172 aaKnown RBP eCLIP14.89□□□□□ -0.03
NUP88-204ENST00000572290 C16orf54Q6UWD8 224 aa14.89□□□□□ -0.03
NUP88-204ENST00000572290 Q6ZWC4 215 aa14.89□□□□□ -0.03
NUP88-204ENST00000572290 STPG3Q8N7X2 389 aa14.89□□□□□ -0.03
NUP88-204ENST00000572290 RNF125Q96EQ8 232 aa14.89□□□□□ -0.03
NUP88-204ENST00000572290 STRAPQ9Y3F4 350 aaKnown RBP14.89□□□□□ -0.03
NUP88-204ENST00000572290 TRAV6A0A075B6T7 132 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 HELTA6NFD8 242 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 H3BP45 60 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 DEFB131AP59861 70 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 ZNF90Q03938 601 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 FAM24BQ8N5W8 94 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 GLMPQ8WWB7 406 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 TP53TG1Q9Y2A0 90 aa14.88□□□□□ -0.03
NUP88-204ENST00000572290 PRSS46E5RG02 174 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 K7EQG2 157 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 AP2S1P53680 142 aaPredicted RBP14.87□□□□□ -0.03
NUP88-204ENST00000572290 IAH1Q2TAA2 248 aaPredicted RBP14.87□□□□□ -0.03
NUP88-204ENST00000572290 ZFAND6Q6FIF0 208 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 TRGV9Q99603 122 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 PBDC1Q9BVG4 233 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 NUDT15Q9NV35 164 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 PSENENQ9NZ42 101 aa14.87□□□□□ -0.03
NUP88-204ENST00000572290 SPRY2O43597 315 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 BUB3O43684 328 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 SSSCA1O60232 199 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 DEFB135Q30KP9 77 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 LEMD1Q68G75 181 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 OR8G2PQ6IF36 304 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 THAP8Q8NA92 274 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 ZBTB8BQ8NAP8 495 aaPredicted RBP14.86□□□□□ -0.03
NUP88-204ENST00000572290 PFDN2Q9UHV9 154 aa14.86□□□□□ -0.03
NUP88-204ENST00000572290 RYR3Q15413 4870 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 FAM240BA0A1B0GVZ2 78 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 SNRPGP15A8MWD9 76 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 SCGB1D2O95969 90 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 NUP62P37198 522 aaPredicted RBP14.85□□□□□ -0.03
NUP88-204ENST00000572290 OR2F1Q13607 317 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 MZT2BQ6NZ67 158 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 DCANP1Q8TF63 244 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 CSTL1Q9H114 145 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 PTTG2Q9NZH5 202 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 GSKIPQ9P0R6 139 aa14.85□□□□□ -0.03
NUP88-204ENST00000572290 IGKV1OR2-108A0A075B7D4 117 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 H2AFB2P0C5Z0 115 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 LYZP61626 148 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 ZNF431Q8TF32 576 aaPredicted RBP14.84□□□□□ -0.03
NUP88-204ENST00000572290 RNF183Q96D59 192 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 SMIM8Q96KF7 97 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 SEC22CQ9BRL7 303 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 WDR12Q9GZL7 423 aaKnown RBP14.84□□□□□ -0.03
NUP88-204ENST00000572290 TBC1D24Q9ULP9 559 aa14.84□□□□□ -0.03
NUP88-204ENST00000572290 ZNF688P0C7X2 276 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 ASAH1Q13510 395 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 ZNF846Q147U1 533 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 SIGLEC15Q6ZMC9 328 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 ACOT7LQ6ZUV0 252 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 IL17DQ8TAD2 202 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 RAB40CQ96S21 281 aa14.83□□□□□ -0.04
NUP88-204ENST00000572290 NBEAL2Q6ZNJ1 2754 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 CCSO14618 274 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 CFDP00746 253 aaPredicted RBP14.82□□□□□ -0.04
NUP88-204ENST00000572290 PAX9P55771 341 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 AKR1C1Q04828 323 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 STHQ8IWL8 128 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 NRN1Q9NPD7 142 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 STARD9Q9P2P6 4700 aa14.82□□□□□ -0.04
NUP88-204ENST00000572290 PMS2P5A8MQ11 134 aa14.81□□□□□ -0.04
NUP88-204ENST00000572290 TAS2R30P59541 319 aa14.81□□□□□ -0.04
NUP88-204ENST00000572290 C12orf45Q8N5I9 185 aaPredicted RBP14.81□□□□□ -0.04
NUP88-204ENST00000572290 SMCO3A2RU48 225 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 FAM25EA8MYX2 175 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 UPK1BO75841 260 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 MBPP02686 304 aaPredicted RBP14.8□□□□□ -0.04
NUP88-204ENST00000572290 TMEM14EPQ6UXP3 125 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 TMEM144Q7Z5S9 345 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 BPIFCQ8NFQ6 507 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 PPP1R14BQ96C90 147 aa14.8□□□□□ -0.04
NUP88-204ENST00000572290 RCL1Q9Y2P8 373 aaKnown RBP14.8□□□□□ -0.04
NUP88-204ENST00000572290 TSC22D2O75157 780 aa14.79□□□□□ -0.04
NUP88-204ENST00000572290 METTL15P1P0C7V9 234 aa14.79□□□□□ -0.04
NUP88-204ENST00000572290 PSMG4Q5JS54 123 aa14.79□□□□□ -0.04
NUP88-204ENST00000572290 C1orf194Q5T5A4 169 aa14.79□□□□□ -0.04
NUP88-204ENST00000572290 SEPSECSQ9HD40 501 aaKnown RBP14.79□□□□□ -0.04
NUP88-204ENST00000572290 FBXL17Q9UF56 701 aa14.79□□□□□ -0.04
NUP88-204ENST00000572290 C5orf51A6NDU8 294 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 KNCNA6PVL3 124 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 CCNKO75909 580 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 CA1P00915 261 aaPredicted RBP14.78□□□□□ -0.04
NUP88-204ENST00000572290 GATA2P23769 480 aaPredicted RBP14.78□□□□□ -0.04
NUP88-204ENST00000572290 SNRPD3P62318 126 aaKnown RBP14.78□□□□□ -0.04
NUP88-204ENST00000572290 OR10P1Q8NGE3 313 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 ENKURQ8TC29 256 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 GATAD1Q8WUU5 269 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 BATF3Q9NR55 127 aa14.78□□□□□ -0.04
NUP88-204ENST00000572290 A0A0J9YWU9 116 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms