RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
CCDC40-207ENST00000572253 POLEQ07864 2286 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 PLCE1Q9P212 2302 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 CORTO00230 105 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 MOSP00540 346 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 VAMP3Q15836 100 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 TCF24Q7RTU0 167 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
CCDC40-207ENST00000572253 ZNF835Q9Y2P0 537 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 VPS13AQ96RL7 3174 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 LGALS7P47929 136 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 ZNF492Q9P255 531 aa8.68□□□□□ -1.02
CCDC40-207ENST00000572253 IGKV1D-37A0A075B6S9 117 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 PPIAL4EA0A075B759 164 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 VSTM5A8MXK1 200 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 PPIAL4DF5H284 164 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 PPIAL4FP0DN26 164 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 TRGV9Q99603 122 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 TMEM191AQ9H0A3 160 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 KLF12Q9Y4X4 402 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 ACACAQ13085 2346 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 IGHV1-69-2A0A0G2JMI3 117 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 E7EUB6 86 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 TOMM40O96008 361 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 RBPMS2Q6ZRY4 209 aaKnown RBP8.67□□□□□ -1.02
CCDC40-207ENST00000572253 SSX8Q7RTT4 187 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 NUP37Q8NFH4 326 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 PGLYRP4Q96LB8 373 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 BDP1A6H8Y1 2624 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 IGLL1P15814 213 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 MYCNOSP40205 109 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 LEMD1Q68G75 181 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 LINC00311Q8N616 119 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
CCDC40-207ENST00000572253 NDUFB8O95169 186 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 RPL27AP46776 148 aaKnown RBP8.66□□□□□ -1.02
CCDC40-207ENST00000572253 FAM27E3Q08E93 113 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 HCP5Q6MZN7 132 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 CLEC5AQ9NY25 188 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 FAM215AQ9Y5M1 114 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 FREM2Q5SZK8 3169 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 A0A1W2PPI3 338 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 FOXA3P55318 350 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-207ENST00000572253 UNQ5815/PRO19632Q6UWF5 114 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 C8orf31Q8N9H6 132 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 GFRA4Q9GZZ7 299 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 C2orf70A6NJV1 201 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 C17orf100A8MU93 164 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 WT1P19544 449 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-207ENST00000572253 Q5PR19 223 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 ASCL5Q7RTU5 278 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 OR4C5Q8NGB2 326 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 Q9H3A6 140 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 ASCL3Q9NQ33 180 aa8.66□□□□□ -1.02
CCDC40-207ENST00000572253 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 COL8A1P27658 744 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 UBE2V1Q13404 147 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 WFDC8Q8IUA0 241 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 HIGD1AQ9Y241 93 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 DYSFO75923 2080 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 TCRAP04437 139 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 DEFB124Q8NES8 71 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 MAP1LC3CQ9BXW4 147 aa8.65□□□□□ -1.02
CCDC40-207ENST00000572253 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
CCDC40-207ENST00000572253 FAM231BA6NCW3 169 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 IGLV2-23P01705 113 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 LIPFP07098 398 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 FTH1P19P0C7X4 201 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 ZNF137PP52743 207 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 MUC15Q8N387 334 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 RPRMLQ8N4K4 120 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 TEX45Q8NA69 505 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 CCL17Q92583 94 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 C1RLQ9NZP8 487 aa8.65□□□□□ -1.03
CCDC40-207ENST00000572253 CGB1A6NKQ9 187 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 TMEM11P17152 192 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 MLST8Q9BVC4 326 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 HSPB8Q9UJY1 196 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 SPTBN1Q01082 2364 aaKnown RBP8.64□□□□□ -1.03
CCDC40-207ENST00000572253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
CCDC40-207ENST00000572253 IGLC7A0M8Q6 106 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 FSTL3O95633 263 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 LTAP01374 205 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 ZNF841Q6ZN19 808 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 C8orf46Q8TAG6 207 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 PRSS22Q9GZN4 317 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 PRRC2CQ9Y520 2896 aaKnown RBP8.64□□□□□ -1.03
CCDC40-207ENST00000572253 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 CRYGCP07315 174 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 SLC25A34Q6PIV7 304 aa8.64□□□□□ -1.03
CCDC40-207ENST00000572253 RAI1Q7Z5J4 1906 aaPredicted RBP8.64□□□□□ -1.03
CCDC40-207ENST00000572253 SPAARA0A1B0GVQ0 90 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms