RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 OR10G9Q8NGN4 311 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 OR10G7Q8NGN6 311 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 C4orf3Q8WVX3 66 aa9.23□□□□□ -0.93
CDRT1-206ENST00000571263 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 HIVEP1P15822 2718 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 A0A1W2PPV4 95 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 WI2-2373I1.2A0A1W2PRP0 233 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 HAX1O00165 279 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 BMPR1BO00238 502 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 NDUFA4O00483 81 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 HYPMO75409 117 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 IGHV3-23P01764 117 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 ZP3P21754 424 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 ADMP35318 185 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 C10orf99Q6UWK7 81 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 MRPL32Q9BYC8 188 aaKnown RBP9.22□□□□□ -0.93
CDRT1-206ENST00000571263 GNB4Q9HAV0 340 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 S4R3C0 116 aa9.22□□□□□ -0.93
CDRT1-206ENST00000571263 TLN2Q9Y4G6 2542 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 COX7A2P2O60397 106 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 IGHV3-11P01762 117 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 HBE1P02100 147 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 ELLP55199 621 aaPredicted RBP9.21□□□□□ -0.94
CDRT1-206ENST00000571263 TAS2R45P59539 299 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 STXBP6Q8NFX7 210 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 DPF1Q92782 380 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 RNF125Q96EQ8 232 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 CHRDL1Q9BU40 450 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 RPRMQ9NS64 109 aa9.21□□□□□ -0.94
CDRT1-206ENST00000571263 SONP18583 2426 aaKnown RBP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 ANKRD34BA5PLL1 514 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 ZNF705EA8MWA4 302 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 SEC14L6B5MCN3 397 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 I3L521 148 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 K7EMT4 169 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 YIF1AO95070 293 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 H2AFB1P0C5Y9 115 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 OR5G3P0C626 314 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 ORM2P19652 201 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 DEFA5Q01523 94 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 RPEL1Q2QD12 228 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 LCNL1Q6ZST4 164 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 MBD3L1Q8WWY6 194 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 NARS2Q96I59 477 aaKnown RBP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 MRPL27Q9P0M9 148 aaKnown RBP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 HIGD1AQ9Y241 93 aa9.2□□□□□ -0.94
CDRT1-206ENST00000571263 PUS1Q9Y606 427 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 ANK3Q12955 4377 aaKnown RBP9.2□□□□□ -0.94
CDRT1-206ENST00000571263 F8P00451 2351 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 TRAV1-1A0A0B4J248 108 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 NUDT19A8MXV4 375 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 LINC01619G3V211 115 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 IL4P05112 153 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 CD28P10747 220 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 GATA2P23769 480 aaPredicted RBP9.19□□□□□ -0.94
CDRT1-206ENST00000571263 BMI1P35226 326 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 CDC34P49427 236 aaPredicted RBP9.19□□□□□ -0.94
CDRT1-206ENST00000571263 LYZP61626 148 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 KHDC1LQ5JSQ8 128 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 CLLU1Q5K131 121 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 FAM78BQ5VT40 261 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 TOMM20LQ6UXN7 152 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 NDUFA11Q86Y39 141 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 RPP25LQ8N5L8 163 aaKnown RBP9.19□□□□□ -0.94
CDRT1-206ENST00000571263 OR1B1Q8NGR6 318 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 OR1N2Q8NGR9 330 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 FAM213BQ8TBF2 198 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 TMEM158Q8WZ71 300 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 METTL26Q96S19 204 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 TECRQ9NZ01 308 aaKnown RBP9.19□□□□□ -0.94
CDRT1-206ENST00000571263 RABAC1Q9UI14 185 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 FUT9Q9Y231 359 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 UFC1Q9Y3C8 167 aa9.19□□□□□ -0.94
CDRT1-206ENST00000571263 A0A1W2PS18 150 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 PPP5D1E7EU14 171 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 LGALS9O00182 355 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 NPPCP23582 126 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 FAM122CQ6P4D5 195 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 PQLC2Q6ZP29 291 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 LINC00305Q7Z4B0 112 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 KLHL30-AS1Q8NEE0 82 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 TMEM37Q8WXS4 190 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 RAB24Q969Q5 203 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 OR5B12Q96R08 314 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 CITED2Q99967 270 aaPredicted RBP9.18□□□□□ -0.94
CDRT1-206ENST00000571263 PBDC1Q9BVG4 233 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 PLA2G2EQ9NZK7 142 aa9.18□□□□□ -0.94
CDRT1-206ENST00000571263 FN1P02751 2386 aaKnown RBP9.17□□□□□ -0.94
CDRT1-206ENST00000571263 CXorf1O96002 111 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 C8orf88P0DMB2 117 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 PPT1P50897 306 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 AWAT1Q58HT5 328 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms