RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 KLF17Q5JT82 389 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-208ENST00000571043 FAM120AOSQ5T036 256 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 PATE2Q6UY27 113 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 ISOC2Q96AB3 205 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 FAM167A-AS1Q96KT0 104 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 SMR3AQ99954 134 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 DOK5Q9P104 306 aa13.67□□□□□ -0.22
RPAIN-208ENST00000571043 K7EIM0 57 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 OR7C2O60412 319 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 LY6G6DO95868 133 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 ASPHD1Q5U4P2 390 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 C11orf52Q96A22 123 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 YPEL4Q96NS1 127 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 UHRF2Q96PU4 802 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 FAM103A1Q9BTL3 118 aaKnown RBP13.66□□□□□ -0.22
RPAIN-208ENST00000571043 SLC25A2Q9BXI2 301 aa13.66□□□□□ -0.22
RPAIN-208ENST00000571043 ZFHX3Q15911 3703 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 IGHV3-21A0A0B4J1V1 117 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 IGHV7-81A0A0B4J1V7 117 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 FSHBP01225 129 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 IGLC1P0CG04 106 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 IGHV4-38-2P0DP08 117 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
RPAIN-208ENST00000571043 NDPQ00604 133 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 OR51G1Q8NGK1 321 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 RASL11BQ9BPW5 248 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 YAE1D1Q9NRH1 226 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 MTORP42345 2549 aa13.65□□□□□ -0.22
RPAIN-208ENST00000571043 IGLV11-55A0A075B6I3 123 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 TRAV40A0A0B4J280 105 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 NDUFB4O95168 129 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 CRYBA1P05813 215 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 FABP1P07148 127 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 KIAA0141Q14154 515 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-208ENST00000571043 ADIRFQ15847 76 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 FAM24BQ8N5W8 94 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 STXBP6Q8NFX7 210 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 ZNF355PQ9NSJ1 428 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 A0A1W2PRE2 83 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 CLDN34H7C241 214 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 HYPMO75409 117 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 FLI1Q01543 452 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-208ENST00000571043 TEX29Q8N6K0 151 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 OR5AU1Q8NGC0 362 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 FANCD2OSQ96PS1 177 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
RPAIN-208ENST00000571043 TRAV5A0A0B4J249 113 aa13.63□□□□□ -0.23
RPAIN-208ENST00000571043 EGR2P11161 476 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-208ENST00000571043 MORN5Q5VZ52 161 aa13.63□□□□□ -0.23
RPAIN-208ENST00000571043 ZNF48Q96MX3 618 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-208ENST00000571043 RBM14Q96PK6 669 aaKnown RBP13.63□□□□□ -0.23
RPAIN-208ENST00000571043 MLXQ9UH92 298 aa13.63□□□□□ -0.23
RPAIN-208ENST00000571043 IGHV3OR16-10A0A075B7F0 116 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 SCO2A0A1W2PP80 73 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 ORM2P19652 201 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 RAB5AP20339 215 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 UBE2L3P68036 154 aaKnown RBP13.62□□□□□ -0.23
RPAIN-208ENST00000571043 KLK9Q2XQG4 91 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 OR1B1Q8NGR6 318 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 PAXXQ9BUH6 204 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 OR51M1Q9H341 326 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 THYN1Q9P016 225 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 KLK9Q9UKQ9 250 aa13.62□□□□□ -0.23
RPAIN-208ENST00000571043 TRAV30A0A087WSZ9 112 aa13.61□□□□□ -0.23
RPAIN-208ENST00000571043 ELOBQ15370 118 aa13.61□□□□□ -0.23
RPAIN-208ENST00000571043 BRD3OSQ6XYD6 125 aa13.61□□□□□ -0.23
RPAIN-208ENST00000571043 SGMS2Q8NHU3 365 aa13.61□□□□□ -0.23
RPAIN-208ENST00000571043 TMEM68Q96MH6 324 aa13.61□□□□□ -0.23
RPAIN-208ENST00000571043 NSD1Q96L73 2696 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-208ENST00000571043 IGKV1-17P01599 117 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 PSG1P11464 419 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 HIST1H1BP16401 226 aaKnown RBP13.6□□□□□ -0.23
RPAIN-208ENST00000571043 MFAP4P55083 255 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 TIGITQ495A1 244 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 LINC01551Q86U37 167 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 ANAPC16Q96DE5 110 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 DERL1Q9BUN8 251 aa13.6□□□□□ -0.23
RPAIN-208ENST00000571043 GSX1Q9H4S2 264 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-208ENST00000571043 OR10J4P0C629 311 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 RD3LP0DJH9 198 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 C9orf139Q6ZV77 190 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 FAM110DQ8TAY7 271 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-208ENST00000571043 HSPB9Q9BQS6 159 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 HIGD1AQ9Y241 93 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 C1orf196B1AJZ1 125 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 C9JCJ5 164 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 TOMM40O96008 361 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-208ENST00000571043 C5orf56Q8N8D9 126 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 FXYD5Q96DB9 178 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
RPAIN-208ENST00000571043 A0A0U1RQK1 487 aa13.58□□□□□ -0.24
RPAIN-208ENST00000571043 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
RPAIN-208ENST00000571043 H7BYZ3 331 aa13.58□□□□□ -0.24
RPAIN-208ENST00000571043 PYYP10082 97 aa13.58□□□□□ -0.24
RPAIN-208ENST00000571043 FCGR2BP31994 310 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms