RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MCFD2Q8NI22 146 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 ZFAND1Q8TCF1 268 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 DYNC2LI1Q8TCX1 351 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 ISOC1Q96CN7 298 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 DGCR14Q96DF8 476 aaKnown RBP2.85□□□□□ -1.95
NUP88-202ENST00000570937 USMG5Q96IX5 58 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 SCGB3A2Q96PL1 93 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 OR2A7Q96R45 310 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 PRRT1Q99946 306 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 COMMD5Q9GZQ3 224 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 NAA50Q9GZZ1 169 aaKnown RBP2.85□□□□□ -1.95
NUP88-202ENST00000570937 HRASLSQ9HDD0 168 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 CCL28Q9NRJ3 127 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 FAM212BQ9NTI7 297 aaPredicted RBP2.85□□□□□ -1.95
NUP88-202ENST00000570937 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 COA4Q9NYJ1 87 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 FKBP11Q9NYL4 201 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 MTFP1Q9UDX5 166 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 CACFD1Q9UGQ2 172 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 NUBP2Q9Y5Y2 271 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 FBN3Q75N90 2809 aa2.85□□□□□ -1.95
NUP88-202ENST00000570937 TET2Q6N021 2002 aaPredicted RBP2.85□□□□□ -1.95
NUP88-202ENST00000570937 IGKV1D-13A0A0B4J2D9 117 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 FAM223BA6NKX1 122 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 RAMP3O60896 148 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 PGLYRP1O75594 196 aaPredicted RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 RAB3DO95716 219 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 HSPB1P04792 205 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 CRYGBP07316 175 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 AKAIN1P0CW23 69 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 SAA1P0DJI8 122 aaPredicted RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 IGKV1-13P0DP09 117 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 DEFA4P12838 97 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 PGAM2P15259 253 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 RPA2P15927 270 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 HIST1H1BP16401 226 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 HLA-GP17693 338 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 ZP3P21754 424 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 F2RP25116 425 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 PTBP1P26599 531 aaKnown RBP eCLIP2.84□□□□□ -1.95
NUP88-202ENST00000570937 GNRHRP30968 328 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 FAUP35544 74 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 INPP1P49441 399 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 INSL3P51460 131 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 TPPP2P59282 170 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 RPL30P62888 115 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 RPL8P62917 257 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 RUNX1Q01196 453 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 DEFA6Q01524 100 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 ATP5G2Q06055 141 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 ZNF616Q08AN1 781 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 PJVKQ0ZLH3 352 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 SURF2Q15527 256 aaPredicted RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 SCGB2B2Q4G0G5 96 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 OR2B11Q5JQS5 317 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 SPANXN2Q5MJ10 180 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 STEAP1BQ6NZ63 245 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 C10orf99Q6UWK7 81 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 IDO2Q6ZQW0 420 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 ZNF818PQ6ZRF7 136 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 FAM223AQ8IWN6 122 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 LAX1Q8IWV1 398 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 TTC9CQ8N5M4 171 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 CCDC71LQ8N9Z2 235 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 NECAP1Q8NC96 275 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 OR5T1Q8NG75 326 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 OR11H1Q8NG94 326 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 OR1L6Q8NGR2 347 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 OR51H1Q8NH63 302 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 TMEM167AQ8TBQ9 72 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 MYOZ3Q8TDC0 251 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 SMIM4Q8WVI0 70 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 GTSF1Q8WW33 167 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 SRSF12Q8WXF0 261 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 DEDD2Q8WXF8 326 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 FAM103A1Q9BTL3 118 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 SLIRPQ9GZT3 109 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 ZNF430Q9H8G1 570 aaPredicted RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 BET1LQ9NYM9 111 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 COMMD9Q9P000 198 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 COPZ2Q9P299 210 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 SCP2D1Q9UJQ7 156 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 PRNDQ9UKY0 176 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 ANAPC10Q9UM13 185 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 C14orf166Q9Y224 244 aaKnown RBP2.84□□□□□ -1.95
NUP88-202ENST00000570937 ZNF257Q9Y2Q1 563 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 PKD1L1Q8TDX9 2849 aa2.84□□□□□ -1.95
NUP88-202ENST00000570937 ANK2Q01484 3957 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 C3orf85A0A1B0GTC6 90 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 SEC14L6B5MCN3 397 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 LINC01619G3V211 115 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 I3L521 148 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 GSTZ1O43708 216 aaPredicted RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 KRASP01116 189 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 CD74P04233 296 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 CD3DP04234 171 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 S100A9P06702 114 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 LGALS1P09382 135 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 ZNF735P0CB33 412 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 TRAPPC2P0DI81 140 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms