RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 OR51G1Q8NGK1 321 aa10.62□□□□□ -0.71
NDE1-203ENST00000570727 IL22RA2Q969J5 263 aa10.62□□□□□ -0.71
NDE1-203ENST00000570727 SCRT1Q9BWW7 348 aa10.62□□□□□ -0.71
NDE1-203ENST00000570727 DYNC1H1Q14204 4646 aaKnown RBP10.62□□□□□ -0.71
NDE1-203ENST00000570727 DEFB131BA0A096LNP1 70 aa10.61□□□□□ -0.71
NDE1-203ENST00000570727 ALDH3B2P48448 385 aa10.61□□□□□ -0.71
NDE1-203ENST00000570727 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
NDE1-203ENST00000570727 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
NDE1-203ENST00000570727 U3KQ87 197 aa10.61□□□□□ -0.71
NDE1-203ENST00000570727 ANKRD20A5PA0PJZ0 165 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 GSTZ1O43708 216 aaPredicted RBP10.6□□□□□ -0.71
NDE1-203ENST00000570727 IFNA10P01566 189 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 NKX2-1P43699 371 aaPredicted RBP10.6□□□□□ -0.71
NDE1-203ENST00000570727 DEFB1P60022 68 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 NUTF2P61970 127 aaKnown RBP10.6□□□□□ -0.71
NDE1-203ENST00000570727 SUPT4H1P63272 117 aaKnown RBP10.6□□□□□ -0.71
NDE1-203ENST00000570727 KLF9Q13886 244 aaPredicted RBP10.6□□□□□ -0.71
NDE1-203ENST00000570727 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 LYZL2Q7Z4W2 148 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 CENPSQ8N2Z9 138 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 PRRT1Q99946 306 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 C1QTNF4Q9BXJ3 329 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 RBKSQ9H477 322 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 HSPB7Q9UBY9 170 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 KCNIP3Q9Y2W7 256 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
NDE1-203ENST00000570727 IGKV1D-37A0A075B6S9 117 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 CCR6P51684 374 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 IL18Q14116 193 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 GAMTQ14353 236 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 SMCO1Q147U7 214 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 ZNF705AQ6ZN79 300 aaPredicted RBP10.59□□□□□ -0.71
NDE1-203ENST00000570727 CLVS1Q8IUQ0 354 aaPredicted RBP10.59□□□□□ -0.71
NDE1-203ENST00000570727 LGI3Q8N145 548 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 RNF125Q96EQ8 232 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 DIRAS2Q96HU8 199 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 NEU1Q99519 415 aa10.59□□□□□ -0.71
NDE1-203ENST00000570727 WDR12Q9GZL7 423 aaKnown RBP10.59□□□□□ -0.71
NDE1-203ENST00000570727 A0A0B4J2A0 478 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 ZNF705FA8MVS1 300 aaPredicted RBP10.58□□□□□ -0.72
NDE1-203ENST00000570727 AMBPP02760 352 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 ZNF705DP0CH99 300 aaPredicted RBP10.58□□□□□ -0.72
NDE1-203ENST00000570727 ZNF705BP0CI00 300 aaPredicted RBP10.58□□□□□ -0.72
NDE1-203ENST00000570727 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
NDE1-203ENST00000570727 ZNF90Q03938 601 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 GSG1LQ6UXU4 331 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 DYNC2LI1Q8TCX1 351 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 SOSTQ9BQB4 213 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 SHPKQ9UHJ6 478 aa10.58□□□□□ -0.72
NDE1-203ENST00000570727 RYR1P21817 5038 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 SOCS3O14543 225 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 AKR1C4P17516 323 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 FXYD7P58549 80 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 OR8G2PQ6IF36 304 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 GPR141Q7Z602 305 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 PBDC1Q9BVG4 233 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 MRPS26Q9BYN8 205 aaKnown RBP10.57□□□□□ -0.72
NDE1-203ENST00000570727 SAV1Q9H4B6 383 aaPredicted RBP10.57□□□□□ -0.72
NDE1-203ENST00000570727 RABL2AQ9UBK7 228 aaPredicted RBP10.57□□□□□ -0.72
NDE1-203ENST00000570727 SCP2D1Q9UJQ7 156 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 RABL2BQ9UNT1 228 aa10.57□□□□□ -0.72
NDE1-203ENST00000570727 DNAH11Q96DT5 4516 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 A0A1B0GVY2 172 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 ZFP92A6NM28 416 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 ATP5IP56385 69 aaPredicted RBP10.56□□□□□ -0.72
NDE1-203ENST00000570727 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 CLUHP3Q96NS8 147 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 SCGB3A2Q96PL1 93 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 NDUFAF3Q9BU61 184 aa10.56□□□□□ -0.72
NDE1-203ENST00000570727 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 PITX3O75364 302 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 SPART-AS1P0CW21 52 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 P0DMU3 169 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 FOXI2Q6ZQN5 318 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 ZNF709Q8N972 641 aa10.55□□□□□ -0.72
NDE1-203ENST00000570727 CCDC59Q9P031 241 aaKnown RBP10.55□□□□□ -0.72
NDE1-203ENST00000570727 RSL24D1Q9UHA3 163 aaKnown RBP10.55□□□□□ -0.72
NDE1-203ENST00000570727 IGKV1OR2-108A0A075B7D4 117 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 SNRPGP15A8MWD9 76 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 TNFSF8P32971 234 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 NUP62P37198 522 aaPredicted RBP10.54□□□□□ -0.72
NDE1-203ENST00000570727 ID1P41134 155 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 PSMB3P49720 205 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 EMP1P54849 157 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 ZNF79Q15937 498 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 OR1S1Q8NH92 325 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 SLC35E1Q96K37 410 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 SLC35B3Q9H1N7 401 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 MCUBQ9NWR8 336 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 PLA2G2EQ9NZK7 142 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 PFDN2Q9UHV9 154 aa10.54□□□□□ -0.72
NDE1-203ENST00000570727 IGHV3OR16-12A0A075B7B8 117 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms