RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 Q8WTZ3 238 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 SPAG8Q99932 426 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-219ENST00000569136 NEURL2Q9BR09 285 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 RHPN1-AS1Q9BWJ2 59 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 WDR12Q9GZL7 423 aaKnown RBP6.9□□□□□ -1.3
CAPN3-219ENST00000569136 FNDC4Q9H6D8 234 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-219ENST00000569136 TMEM231Q9H6L2 316 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 PTTG2Q9NZH5 202 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 MLXQ9UH92 298 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 FLVCR2Q9UPI3 526 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 U3KQK5 164 aa6.9□□□□□ -1.3
CAPN3-219ENST00000569136 IGHV7-4-1A0A0J9YVY3 117 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 FAM240BA0A1B0GVZ2 78 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 OR11H12B2RN74 326 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 CHEK1O14757 476 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 SYNGR2O43760 224 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 FABP1P07148 127 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 BTCP35070 178 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 CD81P60033 236 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 ZNF846Q147U1 533 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 TMEM61Q8N0U2 210 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 OR52B4Q8NGK2 314 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 MITD1Q8WV92 249 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 NARS2Q96I59 477 aaKnown RBP6.89□□□□□ -1.31
CAPN3-219ENST00000569136 METTL26Q96S19 204 aa6.89□□□□□ -1.31
CAPN3-219ENST00000569136 PUS1Q9Y606 427 aaKnown RBP eCLIP6.89□□□□□ -1.31
CAPN3-219ENST00000569136 OR4C46A6NHA9 309 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 IGKV1-17P01599 117 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 RD3LP0DJH9 198 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 ANXA7P20073 488 aaKnown RBP6.88□□□□□ -1.31
CAPN3-219ENST00000569136 OR10J1P30954 320 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 RND2P52198 227 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 ASAH1Q13510 395 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 SBSPONQ8IVN8 264 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 Q8N1X5 172 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 TMEM170AQ8WVE7 144 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 NPIPB3Q92617 1050 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 ASCL2Q99929 193 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 FAM110AQ9BQ89 295 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
CAPN3-219ENST00000569136 TENM3Q9P273 2699 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 WRBO00258 174 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 ZNF207O43670 478 aaKnown RBP6.87□□□□□ -1.31
CAPN3-219ENST00000569136 NXPH3O95157 252 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 CFDP00746 253 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-219ENST00000569136 IGLC1P0CG04 106 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 CRYBB3P26998 211 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 NKX2-1P43699 371 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-219ENST00000569136 EIF2B2P49770 351 aaKnown RBP6.87□□□□□ -1.31
CAPN3-219ENST00000569136 AP2S1P53680 142 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-219ENST00000569136 TIGITQ495A1 244 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 GRAMD2BQ96HH9 432 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 SLC35E1Q96K37 410 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 SMIM8Q96KF7 97 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 RAB40CQ96S21 281 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 C20orf85Q9H1P6 137 aa6.87□□□□□ -1.31
CAPN3-219ENST00000569136 STRAPQ9Y3F4 350 aaKnown RBP6.87□□□□□ -1.31
CAPN3-219ENST00000569136 IGHV3OR16-8A0A075B7F1 116 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 TRAV2A0A0B4J234 112 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 SNRPGP15A8MWD9 76 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 DNASE2O00115 360 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 ADAP1O75689 374 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 UPK1BO75841 260 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 IL5P05113 134 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 CD7P09564 240 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 EDN2P20800 178 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 S100A7P31151 101 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 NUP62P37198 522 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 TAS2R30P59541 319 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 DEFA1P59665 94 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 DEFA3P59666 94 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 GAMTQ14353 236 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 HAGHQ16775 308 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 IAH1Q2TAA2 248 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 FAM90A2PQ658T7 463 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 ZNF431Q8TF32 576 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 ACY3Q96HD9 319 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 RNF2Q99496 336 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 NUDT15Q9NV35 164 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 MRPL36Q9P0J6 103 aaKnown RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 GSKIPQ9P0R6 139 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 PAIP2BQ9ULR5 123 aaKnown RBP6.86□□□□□ -1.31
CAPN3-219ENST00000569136 STAB2Q8WWQ8 2551 aa6.86□□□□□ -1.31
CAPN3-219ENST00000569136 TRAV6A0A075B6T7 132 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 HELTA6NFD8 242 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 ZFP92A6NM28 416 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 DFFBO76075 338 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 TOMM40O96008 361 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 IAPPP10997 89 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 SPANXN5Q5MJ07 72 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 TCF24Q7RTU0 167 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 C12orf45Q8N5I9 185 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-219ENST00000569136 DEFB125Q8N687 156 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 OR51G1Q8NGK1 321 aa6.85□□□□□ -1.31
CAPN3-219ENST00000569136 OR4D5Q8NGN0 318 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms