RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 RABAC1Q9UI14 185 aa21.6■■□□□ 1.05
RAB40C-211ENST00000568586 MPTX1A8MV57 137 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 IAPPP10997 89 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 ID3Q02535 119 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 CNPY1Q3B7I2 92 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 STXBP6Q8NFX7 210 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 OR51G1Q8NGK1 321 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 SLC35E1Q96K37 410 aa21.59■■□□□ 1.05
RAB40C-211ENST00000568586 PRSS46E5RG02 174 aa21.58■■□□□ 1.05
RAB40C-211ENST00000568586 OR4E1P0C645 316 aa21.58■■□□□ 1.05
RAB40C-211ENST00000568586 LYG2Q86SG7 212 aa21.58■■□□□ 1.05
RAB40C-211ENST00000568586 RPP30P78346 268 aaKnown RBP21.57■■□□□ 1.04
RAB40C-211ENST00000568586 GATAD1Q8WUU5 269 aa21.57■■□□□ 1.04
RAB40C-211ENST00000568586 RNF125Q96EQ8 232 aa21.57■■□□□ 1.04
RAB40C-211ENST00000568586 PLECQ15149 4684 aaKnown RBP21.56■■□□□ 1.04
RAB40C-211ENST00000568586 LINC00854A0A1B0GVQ3 168 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 ADAP1O75689 374 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 LEMD1Q68G75 181 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 OR8G2PQ6IF36 304 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 THAP8Q8NA92 274 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 COQ8AQ8NI60 647 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 MAGT1Q9H0U3 335 aa21.56■■□□□ 1.04
RAB40C-211ENST00000568586 SEPSECSQ9HD40 501 aaKnown RBP21.56■■□□□ 1.04
RAB40C-211ENST00000568586 A0A0J9YWU9 116 aa21.55■■□□□ 1.04
RAB40C-211ENST00000568586 ZFP92A6NM28 416 aa21.55■■□□□ 1.04
RAB40C-211ENST00000568586 PLA2G10O15496 165 aa21.55■■□□□ 1.04
RAB40C-211ENST00000568586 ZNF90Q03938 601 aa21.55■■□□□ 1.04
RAB40C-211ENST00000568586 TRGV9Q99603 122 aa21.55■■□□□ 1.04
RAB40C-211ENST00000568586 WRBO00258 174 aa21.54■■□□□ 1.04
RAB40C-211ENST00000568586 FABP1P07148 127 aa21.54■■□□□ 1.04
RAB40C-211ENST00000568586 ANXA7P20073 488 aaKnown RBP21.54■■□□□ 1.04
RAB40C-211ENST00000568586 LINC00299Q6ZSB3 139 aa21.54■■□□□ 1.04
RAB40C-211ENST00000568586 IGKV1OR2-108A0A075B7D4 117 aa21.53■■□□□ 1.04
RAB40C-211ENST00000568586 NUP62P37198 522 aaPredicted RBP21.53■■□□□ 1.04
RAB40C-211ENST00000568586 OR4D5Q8NGN0 318 aa21.53■■□□□ 1.04
RAB40C-211ENST00000568586 ZNF688P0C7X2 276 aa21.52■■□□□ 1.04
RAB40C-211ENST00000568586 EWSR1Q01844 656 aaKnown RBP eCLIP21.52■■□□□ 1.048e-7■■■■□ 22.8
RAB40C-211ENST00000568586 TRPT1Q86TN4 253 aaKnown RBP21.52■■□□□ 1.04
RAB40C-211ENST00000568586 PFDN2Q9UHV9 154 aa21.52■■□□□ 1.04
RAB40C-211ENST00000568586 SNRPGP15A8MWD9 76 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 IFNA21P01568 189 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 C4orf46Q504U0 113 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 SIGLEC15Q6ZMC9 328 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 STHQ8IWL8 128 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 MITD1Q8WV92 249 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 NRN1Q9NPD7 142 aa21.51■■□□□ 1.03
RAB40C-211ENST00000568586 STRAPQ9Y3F4 350 aaKnown RBP21.5■■□□□ 1.03
RAB40C-211ENST00000568586 LYRM1O43325 122 aa21.49■■□□□ 1.03
RAB40C-211ENST00000568586 CA1P00915 261 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-211ENST00000568586 GIG44P09565 113 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-211ENST00000568586 NKX2-1P43699 371 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-211ENST00000568586 SPANXN5Q5MJ07 72 aa21.49■■□□□ 1.03
RAB40C-211ENST00000568586 C1orf194Q5T5A4 169 aa21.49■■□□□ 1.03
RAB40C-211ENST00000568586 PAIP2BQ9ULR5 123 aaKnown RBP21.49■■□□□ 1.03
RAB40C-211ENST00000568586 CFDP00746 253 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-211ENST00000568586 POLR2GP62487 172 aaKnown RBP eCLIP21.48■■□□□ 1.03
RAB40C-211ENST00000568586 TMEM217Q8N7C4 229 aa21.48■■□□□ 1.03
RAB40C-211ENST00000568586 RARRES2Q99969 163 aa21.48■■□□□ 1.03
RAB40C-211ENST00000568586 PBDC1Q9BVG4 233 aa21.48■■□□□ 1.03
RAB40C-211ENST00000568586 AGRNO00468 2067 aa21.48■■□□□ 1.03
RAB40C-211ENST00000568586 TMEM41BQ5BJD5 291 aa21.47■■□□□ 1.03
RAB40C-211ENST00000568586 MORN3Q6PF18 240 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-211ENST00000568586 SMIM8Q96KF7 97 aa21.47■■□□□ 1.03
RAB40C-211ENST00000568586 RAB40CQ96S21 281 aa21.47■■□□□ 1.03
RAB40C-211ENST00000568586 CCDC32Q9BV29 185 aa21.47■■□□□ 1.03
RAB40C-211ENST00000568586 C20orf85Q9H1P6 137 aa21.47■■□□□ 1.03
RAB40C-211ENST00000568586 SPP1P10451 314 aa21.46■■□□□ 1.03
RAB40C-211ENST00000568586 ALMS1Q8TCU4 4167 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 KNCNA6PVL3 124 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 PMS2P5A8MQ11 134 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 H3BP45 60 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 PAX9P55771 341 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 SNRPD3P62318 126 aaKnown RBP21.45■■□□□ 1.02
RAB40C-211ENST00000568586 OR2F1Q13607 317 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 PSMG4Q5JS54 123 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 OR11H2Q8NH07 326 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 C11orf68Q9H3H3 251 aaKnown RBP21.45■■□□□ 1.02
RAB40C-211ENST00000568586 FBXL17Q9UF56 701 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 SLC45A2Q9UMX9 530 aa21.45■■□□□ 1.02
RAB40C-211ENST00000568586 TCRBP04435 133 aa21.44■■□□□ 1.02
RAB40C-211ENST00000568586 LYZP61626 148 aa21.44■■□□□ 1.02
RAB40C-211ENST00000568586 PSENENQ9NZ42 101 aa21.44■■□□□ 1.02
RAB40C-211ENST00000568586 IAH1Q2TAA2 248 aaPredicted RBP21.43■■□□□ 1.02
RAB40C-211ENST00000568586 ACTL10Q5JWF8 245 aa21.43■■□□□ 1.02
RAB40C-211ENST00000568586 ACOT7LQ6ZUV0 252 aa21.43■■□□□ 1.02
RAB40C-211ENST00000568586 TMEM144Q7Z5S9 345 aa21.43■■□□□ 1.02
RAB40C-211ENST00000568586 TAS2R30P59541 319 aa21.42■■□□□ 1.02
RAB40C-211ENST00000568586 TMEM14EPQ6UXP3 125 aa21.42■■□□□ 1.02
RAB40C-211ENST00000568586 ZBTB8BQ8NAP8 495 aaPredicted RBP21.42■■□□□ 1.02
RAB40C-211ENST00000568586 SSSCA1O60232 199 aa21.41■■□□□ 1.02
RAB40C-211ENST00000568586 JTBO76095 146 aa21.41■■□□□ 1.02
RAB40C-211ENST00000568586 CXorf65A6NEN9 183 aa21.4■■□□□ 1.02
RAB40C-211ENST00000568586 NUPR2A6NF83 97 aa21.4■■□□□ 1.02
RAB40C-211ENST00000568586 SOCS3O14543 225 aa21.4■■□□□ 1.02
RAB40C-211ENST00000568586 C4BPBP20851 252 aa21.4■■□□□ 1.02
RAB40C-211ENST00000568586 TMEM182Q6ZP80 229 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-211ENST00000568586 FNDC10F2Z333 226 aa21.39■■□□□ 1.01
RAB40C-211ENST00000568586 CEMP1Q6PRD7 247 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-211ENST00000568586 CSNK1G2-AS1Q8NCQ2 148 aa21.39■■□□□ 1.01
RAB40C-211ENST00000568586 BPIFCQ8NFQ6 507 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms