RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
NME3-211ENST00000568561 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 TEX13DA0A0J9YY54 714 aaPredicted RBP11.11□□□□□ -0.63
NME3-211ENST00000568561 CD74P04233 296 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 AP2S1P53680 142 aaPredicted RBP11.11□□□□□ -0.63
NME3-211ENST00000568561 TAS2R19P59542 299 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 STEAP1BQ6NZ63 245 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 MZT2AQ6P582 158 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 FAM219AQ8IW50 185 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 TMEM229BQ8NBD8 167 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
NME3-211ENST00000568561 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
NME3-211ENST00000568561 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
NME3-211ENST00000568561 PRR13Q9NZ81 148 aa11.11□□□□□ -0.63
NME3-211ENST00000568561 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 BUB3O43684 328 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 NPY1RP25929 384 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 NUTF2P61970 127 aaKnown RBP11.1□□□□□ -0.63
NME3-211ENST00000568561 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 SLIRPQ9GZT3 109 aaKnown RBP11.1□□□□□ -0.63
NME3-211ENST00000568561 PTTG2Q9NZH5 202 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
NME3-211ENST00000568561 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
NME3-211ENST00000568561 NACAE9PAV3 2078 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 B3GALNT1O75752 331 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 TOMM40O96008 361 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 PSG1P11464 419 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 ZNF705AQ6ZN79 300 aaPredicted RBP11.09□□□□□ -0.63
NME3-211ENST00000568561 AP3S1Q92572 193 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 PBDC1Q9BVG4 233 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
NME3-211ENST00000568561 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
NME3-211ENST00000568561 ZNF705FA8MVS1 300 aaPredicted RBP11.08□□□□□ -0.64
NME3-211ENST00000568561 GSTZ1O43708 216 aaPredicted RBP11.08□□□□□ -0.64
NME3-211ENST00000568561 ZNF705DP0CH99 300 aaPredicted RBP11.08□□□□□ -0.64
NME3-211ENST00000568561 ZNF705BP0CI00 300 aaPredicted RBP11.08□□□□□ -0.64
NME3-211ENST00000568561 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
NME3-211ENST00000568561 UBE2DNLQ8IWF7 75 aa11.08□□□□□ -0.64
NME3-211ENST00000568561 RNF125Q96EQ8 232 aa11.08□□□□□ -0.64
NME3-211ENST00000568561 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
NME3-211ENST00000568561 MIXL1Q9H2W2 232 aa11.08□□□□□ -0.64
NME3-211ENST00000568561 CRYM-AS1A6NIL9 109 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 IFNA10P01566 189 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 HTN3P15516 51 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 NKX2-1P43699 371 aaPredicted RBP11.07□□□□□ -0.64
NME3-211ENST00000568561 NMSQ5H8A3 153 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 ETFRF1Q6IPR1 90 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
NME3-211ENST00000568561 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
NME3-211ENST00000568561 F6UB75 175 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 GABARAPH6UMI1 98 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 SULT1A3P0DMM9 295 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 SULT1A4P0DMN0 295 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 FAM222AQ5U5X8 452 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 NEU1Q99519 415 aa11.06□□□□□ -0.64
NME3-211ENST00000568561 SAV1Q9H4B6 383 aaPredicted RBP11.06□□□□□ -0.64
NME3-211ENST00000568561 DISC1C4P0D8 188 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 RGS5O15539 181 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 ZNF90Q03938 601 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 MCFD2Q8NI22 146 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 COQ8AQ8NI60 647 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 RBKSQ9H477 322 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 GPR132Q9UNW8 380 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 TMEM56-RWDD3S4R434 201 aa11.05□□□□□ -0.64
NME3-211ENST00000568561 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 ZFP92A6NM28 416 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 SOCS3O14543 225 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 IFNA21P01568 189 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 LYZP61626 148 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 OR2F1Q13607 317 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 KLF9Q13886 244 aaPredicted RBP11.04□□□□□ -0.64
NME3-211ENST00000568561 SURF2Q15527 256 aaPredicted RBP11.04□□□□□ -0.64
NME3-211ENST00000568561 FOXI2Q6ZQN5 318 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 LINC00299Q6ZSB3 139 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 LGI3Q8N145 548 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 OR51S1Q8NGJ8 323 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 DTD1Q8TEA8 209 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 C15orf40Q8WUR7 153 aa11.04□□□□□ -0.64
NME3-211ENST00000568561 HSPG2P98160 4391 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 CTDSP2O14595 271 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 PSMB3P49720 205 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 OR8G2PQ6IF36 304 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 Q6ZR54 194 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 LYZL2Q7Z4W2 148 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 NOXA1Q86UR1 476 aa11.03□□□□□ -0.64
NME3-211ENST00000568561 C1orf158Q8N1D5 194 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms