RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
TSC2-222ENST00000568454 TNS1Q9HBL0 1735 aaKnown RBP13.72□□□□□ -0.21
TSC2-222ENST00000568454 PARP14Q460N5 1801 aa13.72□□□□□ -0.21
TSC2-222ENST00000568454 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
TSC2-222ENST00000568454 DMRTC2Q8IXT2 367 aaPredicted RBP13.72□□□□□ -0.21
TSC2-222ENST00000568454 TRAV8-1A0A0A6YYK1 113 aa13.71□□□□□ -0.21
TSC2-222ENST00000568454 TMEM167AQ8TBQ9 72 aa13.71□□□□□ -0.21
TSC2-222ENST00000568454 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
TSC2-222ENST00000568454 OR10W1Q8NGF6 305 aa13.71□□□□□ -0.21
TSC2-222ENST00000568454 SVILO95425 2214 aa13.71□□□□□ -0.21
TSC2-222ENST00000568454 NPIPB5A8MRT5 1133 aa13.71□□□□□ -0.22
TSC2-222ENST00000568454 Q0VG73 95 aa13.71□□□□□ -0.22
TSC2-222ENST00000568454 TMEM86BQ8N661 226 aa13.71□□□□□ -0.22
TSC2-222ENST00000568454 LINC01560Q8TB33 94 aa13.71□□□□□ -0.22
TSC2-222ENST00000568454 NCR2O95944 276 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 FOXF2Q12947 444 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 GFRA3O60609 400 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 LGALS1P09382 135 aaKnown RBP13.7□□□□□ -0.22
TSC2-222ENST00000568454 OCIAD2Q56VL3 154 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 LYZL1Q6UWQ5 148 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 FLVCR1-AS1Q8TAF5 88 aa13.7□□□□□ -0.22
TSC2-222ENST00000568454 IGLV3-19P01714 112 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 TRGV9Q99603 122 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 C2orf82Q6UX34 121 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 POLR3KQ9Y2Y1 108 aaPredicted RBP13.69□□□□□ -0.22
TSC2-222ENST00000568454 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 PEMTQ9UBM1 199 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 TRBV6-6A0A0A6YYG2 114 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 RPUSD1Q9UJJ7 312 aaKnown RBP13.69□□□□□ -0.22
TSC2-222ENST00000568454 MAJINQ3KP22 176 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 DPH3Q96FX2 82 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 RFNGQ9Y644 331 aa13.69□□□□□ -0.22
TSC2-222ENST00000568454 APC2O95996 2303 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 SPINK8P0C7L1 97 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 MALP21145 153 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
TSC2-222ENST00000568454 MST1LQ2TV78 715 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 IGKV1-27A0A075B6S5 117 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 PMS2P5A8MQ11 134 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 IGHV3-11P01762 117 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 CRPP02741 224 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 S100A7L2Q5SY68 101 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 ADAMTSL5Q6ZMM2 481 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 PHLDA1Q8WV24 401 aaPredicted RBP13.68□□□□□ -0.22
TSC2-222ENST00000568454 SCN2AQ99250 2005 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 HAX1O00165 279 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 TNFRSF6BO95407 300 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 QRFPP83859 136 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 ARID2Q68CP9 1835 aa13.68□□□□□ -0.22
TSC2-222ENST00000568454 TMEM249Q2WGJ8 235 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 C9orf106Q8NAJ2 232 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 NABP1Q96AH0 204 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 PF4P02776 101 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 ZNF562Q6V9R5 426 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 CCL19Q99731 98 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 CHAC1Q9BUX1 264 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 PRR19A6NJB7 356 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 SPSB3Q6PJ21 355 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 Q6ZS49 121 aa13.67□□□□□ -0.22
TSC2-222ENST00000568454 IGKV2-40A0A087WW87 121 aaPredicted RBP13.66□□□□□ -0.22
TSC2-222ENST00000568454 IGKV2D-40P01614 121 aaPredicted RBP13.66□□□□□ -0.22
TSC2-222ENST00000568454 PSG3Q16557 428 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 ZC2HC1BQ5TFG8 222 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 EXOC3-AS1Q8N2X6 119 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 IGHV3-64A0A075B6Q5 118 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 SNHG12Q9BXW3 62 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 TFF1P04155 84 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 CD33P20138 364 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 CST9LQ9H4G1 147 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 GBF1Q92538 1859 aa13.66□□□□□ -0.22
TSC2-222ENST00000568454 A0A1B0GWJ7 208 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 SRRM5B3KS81 715 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 FGFBP3Q8TAT2 258 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 OVOL2Q9BRP0 275 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 SCRT1Q9BWW7 348 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
TSC2-222ENST00000568454 IGHV2-70P01814 119 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 ZNF883P0CG24 379 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 AHCTF1Q8WYP5 2266 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 FNDC10F2Z333 226 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 SIGLEC15Q6ZMC9 328 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 LYPD1Q8N2G4 141 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 GFRA4Q9GZZ7 299 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 BMPERQ8N8U9 685 aa13.65□□□□□ -0.22
TSC2-222ENST00000568454 TMEM8BA6NDV4 472 aa13.65□□□□□ -0.23
TSC2-222ENST00000568454 NTF4P34130 210 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 MTCL1Q9Y4B5 1905 aaKnown RBP13.64□□□□□ -0.23
TSC2-222ENST00000568454 TIMM23O14925 209 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 DPH3P1Q9H4G8 78 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 SH2D1AO60880 128 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 TOMM40O96008 361 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 LINC00158P58513 81 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 ABHD17AQ96GS6 310 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
TSC2-222ENST00000568454 PAX8Q06710 450 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
TSC2-222ENST00000568454 BRWD3Q6RI45 1802 aa13.63□□□□□ -0.23
TSC2-222ENST00000568454 A0A0U1RRA0 63 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms