RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 HRH4Q9H3N8 390 aa13.72□□□□□ -0.21
SPSB3-210ENST00000568416 SEPSECSQ9HD40 501 aaKnown RBP13.72□□□□□ -0.21
SPSB3-210ENST00000568416 X6R8D5 127 aa13.72□□□□□ -0.21
SPSB3-210ENST00000568416 FAM90A26D6RGX4 464 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 DEDDO75618 318 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
SPSB3-210ENST00000568416 SIGLEC15Q6ZMC9 328 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 OR51G1Q8NGK1 321 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 C2CD4CQ8TF44 421 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 TRIM63Q969Q1 353 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 NRN1Q9NPD7 142 aa13.71□□□□□ -0.21
SPSB3-210ENST00000568416 PITX3O75364 302 aa13.7□□□□□ -0.22
SPSB3-210ENST00000568416 GPX4P36969 197 aaPredicted RBP13.7□□□□□ -0.22
SPSB3-210ENST00000568416 TCTAP57738 103 aa13.7□□□□□ -0.22
SPSB3-210ENST00000568416 OR1S1Q8NH92 325 aa13.7□□□□□ -0.22
SPSB3-210ENST00000568416 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
SPSB3-210ENST00000568416 CLEC5AQ9NY25 188 aa13.7□□□□□ -0.22
SPSB3-210ENST00000568416 IGKV1D-37A0A075B6S9 117 aa13.69□□□□□ -0.22
SPSB3-210ENST00000568416 DUXBA0A1W2PPF3 345 aa13.69□□□□□ -0.22
SPSB3-210ENST00000568416 C11orf94C9JXX5 98 aa13.69□□□□□ -0.22
SPSB3-210ENST00000568416 FAUP35544 74 aaKnown RBP13.69□□□□□ -0.22
SPSB3-210ENST00000568416 SNRPD3P62318 126 aaKnown RBP13.69□□□□□ -0.22
SPSB3-210ENST00000568416 GAMTQ14353 236 aa13.69□□□□□ -0.22
SPSB3-210ENST00000568416 PIGBOS1A0A0B4J2F0 54 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 TMEM128Q5BJH2 165 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 OR8G2PQ6IF36 304 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 TOMM5Q8N4H5 51 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 LRTM2Q8N967 370 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 TBC1D24Q9ULP9 559 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 V9GYH0 126 aa13.68□□□□□ -0.22
SPSB3-210ENST00000568416 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
SPSB3-210ENST00000568416 ZFP92A6NM28 416 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 H3BMM0 161 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 NUP62P37198 522 aaPredicted RBP13.67□□□□□ -0.22
SPSB3-210ENST00000568416 AP3S2P59780 193 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 ZNF90Q03938 601 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 TMED4Q7Z7H5 227 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 SLC35E1Q96K37 410 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 PBDC1Q9BVG4 233 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 APLNQ9ULZ1 77 aa13.67□□□□□ -0.22
SPSB3-210ENST00000568416 KMT2AQ03164 3969 aa13.66□□□□□ -0.22
SPSB3-210ENST00000568416 SLC25A6P12236 298 aa13.66□□□□□ -0.22
SPSB3-210ENST00000568416 HLA-DMBP28068 263 aa13.66□□□□□ -0.22
SPSB3-210ENST00000568416 IGLL5B9A064 214 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 IAPPP10997 89 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 HLA-DRB4P13762 266 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 NKX2-1P43699 371 aaPredicted RBP13.65□□□□□ -0.22
SPSB3-210ENST00000568416 NUTF2P61970 127 aaKnown RBP13.65□□□□□ -0.22
SPSB3-210ENST00000568416 PRR20EP86478 221 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 PRR20CP86479 221 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 PRR20DP86480 221 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 PRR20BP86481 221 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 PRR20AP86496 221 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 ZNF79Q15937 498 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 Q6ZTC4 211 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 SLC25A21Q9BQT8 299 aaPredicted RBP13.65□□□□□ -0.22
SPSB3-210ENST00000568416 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 PFDN2Q9UHV9 154 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 HLA-DRB4X5D2U9 266 aa13.65□□□□□ -0.22
SPSB3-210ENST00000568416 FABP1P07148 127 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 VAMP1P23763 118 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 RAB11AP62491 216 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 DEDD2Q8WXF8 326 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 TRGV9Q99603 122 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 XCL2Q9UBD3 114 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 VPS13DQ5THJ4 4388 aa13.64□□□□□ -0.23
SPSB3-210ENST00000568416 TRAV10A0A0B4J240 114 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 SFT2D2O95562 160 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 LYZP61626 148 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 C1orf194Q5T5A4 169 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 THAP8Q8NA92 274 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 WDR12Q9GZL7 423 aaKnown RBP13.63□□□□□ -0.23
SPSB3-210ENST00000568416 CELA1Q9UNI1 258 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 TMED3Q9Y3Q3 217 aa13.63□□□□□ -0.23
SPSB3-210ENST00000568416 DNAH10Q8IVF4 4471 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 SNRPGP15A8MWD9 76 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 PRSS46E5RG02 174 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 SOCS3O14543 225 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 MED6O75586 246 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 DEFB1P60022 68 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 PPP1R1AQ13522 171 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 OR2F1Q13607 317 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 GDF5OSQ5U4N7 250 aa13.62□□□□□ -0.23
SPSB3-210ENST00000568416 S100A5P33763 92 aa13.61□□□□□ -0.23
SPSB3-210ENST00000568416 PSMB3P49720 205 aa13.61□□□□□ -0.23
SPSB3-210ENST00000568416 CIB3Q96Q77 187 aaPredicted RBP13.61□□□□□ -0.23
SPSB3-210ENST00000568416 SAV1Q9H4B6 383 aaPredicted RBP13.61□□□□□ -0.23
SPSB3-210ENST00000568416 AGRNO00468 2067 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 SYNGR2O43760 224 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 ID1P41134 155 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 ZNF705AQ6ZN79 300 aaPredicted RBP13.6□□□□□ -0.23
SPSB3-210ENST00000568416 FOXI2Q6ZQN5 318 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 CENPSQ8N2Z9 138 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 LINC00052Q96N35 136 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 CLUHP3Q96NS8 147 aa13.6□□□□□ -0.23
SPSB3-210ENST00000568416 NEU1Q99519 415 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms